 |
| Job Description | P76128 | | Confidence | 25.81% | Date | Thu Jan 5 12:19:19 GMT 2012 |
| Rank | 76 | Aligned Residues | 30 |
| % Identity | 17% | Template | c3iibA_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:peptidase m28; |
PDBTitle: crystal structure of peptidase m28 precursor (yp_926796.1) from2 shewanella amazonensis sb2b at 1.70 a resolution
|
| Resolution | 1.70 Å |
|
| | |
364 | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | |
. | . | . | 390 | . | . | . |
| Predicted Secondary structure | |
|
|
|  | | | | | | | | | | | | | | | |
|
|
|  | . |  | | | | |
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| Query Sequence | |
D | N | D | P | N | W | E | P | I | A | L | A | T | Q | S | S | L | N | K | L | G | I | I | . |
V | K | L | E | K | L | A |
| Query Conservation | |
| | | | | | | | |
| | |
| | | |
| | | |
|
| | . |
| |
| | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
| | | |
|
| |
|
| | | |
| | | |
|
| | |
| | |
| |
| |
| Template Sequence | |
A | G | S | E | Q | D | K | V | A | V | D | W | A | I | A | K | L | Q | S | L | G | F | D | R | V | Y | K | E | P | V | T |
| Template Known Secondary structure | |
T | T | S | | | | | | | | | | | | | | | | | T | T |
| S | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
| | | | | | | | | | | | | | | | |
|
|
|
|
| | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
