Job Description P76128 Confidence 96.21% Date Thu Jan 5 12:19:19 GMT 2012 Rank 22 Aligned Residues 81 % Identity 21% Template c3chgB_ PDB info PDB header:ligand binding protein Chain: B: PDB Molecule:glycine betaine-binding protein; PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		340	.	.	.	.	.	.	.	.	.	350	.	.														.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	T	K	A	K	A	E	W	D	K	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	P	T	S	L	T	F	L	Y	S	D	N	D	P	N	W	E	P	I	A	L	A	T	Q	S	S	L	N	K	L	G	I	I	V	K	L	E	K	L	A	N	A	T	M	R	D	R	V	G	K	G	D	Y
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																								.
Template Sequence		K	P	A	K	V	A	A	E	Y	V	N	K	H	K	D	Q	I	A	E	W	T	K	G	V	Q	K	V	K	G	D	K	I	N	L	A	Y	V	A	.	W	D	S	E	I	A	S	T	N	V	I	G	K	V	L	E	D	L	G	Y	E	V	T	L	T	Q	V	E	A	G	P	M	W	T	A	I	A	T	G	S	A
Template Known Secondary structure																						T	T	T					S	S										.																	T	T	T										T	T								T	T	S	S
Template Predicted Secondary structure																																								.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	A	I	G	N	W	S	P	D	F	A	D	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	S	L	S	A	W	L	P	N	T	H	K	A	Y
Template Known Secondary structure		S								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions