Job Description Q47147 Confidence 100.00% Date Thu Jan 5 12:36:22 GMT 2012 Rank 2 Aligned Residues 201 % Identity 21% Template c3mdnD_ PDB info PDB header:transferase Chain: D: PDB Molecule:glutamine aminotransferase class-ii domain protein; PDBTitle: structure of glutamine aminotransferase class-ii domain protein2 (spo2029) from silicibacter pomeroyi Resolution 2.09 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		C	E	L	L	G	M	S	A	N	V	P	T	D	I	C	F	S	F	T	G	L	V	Q	R	G	G	G	T	G	P	H	K	D	G	W	G	I	T	F	Y	.	E	G	K	G	C	R	T	F	K	D	P	Q	P	S	F	N	S	P	I	A	K	L	V	Q	D	Y	P	I	K	S	C	S	V	V	A	H	I	R	Q
Query Conservation																																										.
Alig confidence											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																											.												.
Template Conservation											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.												.
Template Sequence		C	R	W	A	A	Y	H	G	T	.	P	I	F	L	E	D	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	V	A	W	Y	D	A	R	P	E	P	G	L	Y	R	D	V	Y	P	A	W	S	D	P	N	L	R	A	V	A	H	H	.	V	R	S	G	L	F	L	S	H	V	N	.
Template Known Secondary structure											.				G	G	G	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S	S	S							S	S		T	T	T											.												.
Template Predicted Secondary structure											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.												.
Template SS confidence
		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.																	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.										.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.
Query Sequence		A	N	R	G	E	V	A	L	E	N	T	H	P	F	T	R	E	L	W	G	R	N	W	T	Y	A	H	N	G	Q	L	T	G	Y	K	S	L	E	T	G	N	.	.	.	.	.	.	.	.	.	F	R	P	V	G	E	T	D	S	E	K	A	F	C	W	L	L	H	K	L	T	Q	R	Y	P	R	T	P	G	N
Query Conservation																																											.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.								.	.	.	.																						.	.	.	.	.	.	.	.	.																								.	.
Template Conservation		.	.	.	.	.	.	.	.	.								.	.	.	.																																																						.	.
Template Sequence		.	.	.	.	.	.	.	.	.	N	C	H	P	F	A	A	.	.	.	.	R	R	W	C	F	X	H	N	G	Q	V	G	G	F	E	A	F	R	K	Q	A	D	X	A	I	A	D	E	F	Y	T	Y	R	K	G	S	T	D	S	E	V	L	F	L	L	A	L	S	E	G	L	E	H	.	.	D	P	H	G	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.			S					.	.	.	.	T	T										T	T	G	G	G	G							T	S						T	T			S														T	T	T	T	T	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.								.	.	.	.																																																						.	.
Template SS confidence
											98	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		M	A	A	V	F	K	Y	I	A	S	L	A	D	E	.	.	L	R	Q	K	G	V	F	N	M	L	L	S	D	G	R	Y	V	M	A	Y	C	S	T	N	L	H	W	I	T	R	R	A	P	F	G	V	A	T	L	L	D	Q	D	V	E	I	D	F	S	S	Q	T	T	P	N	D	V	V	T	V	I	A	T	Q
Query Conservation																.	.
Alig confidence																.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	R	A	I	A	R	L	E	G	L	S	R	A	H	G	T	T	P	H	X	R	L	S	A	A	F	S	D	G	Q	T	L	Y	A	A	R	Y	S	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	A	P	S	V	Y	Y	R	Y	S	H	A	R	Q	G	W	A	V	V	S	E
Template Known Secondary structure																	S		S	S	S										S	S									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											T	T	T	T						S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		P	L	T	G	N	E	.	T	W	Q	K	I	M	P	G	E	W	R	L	F	C	L	G	E	R
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		P	L	E	T	D	E	G	D	W	T	E	L	R	P	G	R	X	L	T	I	G	A	E	G	A
Template Known Secondary structure						S	S								T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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