Job Description Q47147 Confidence 99.47% Date Thu Jan 5 12:36:22 GMT 2012 Rank 15 Aligned Residues 177 % Identity 21% Template c2vdcF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:glutamate synthase [nadph] large chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. Resolution 9.50 Å

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		48	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure												.																																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	K	D	P	Q	P	S	F	N	.	S	P	I	A	K	L	V	Q	D	Y	P	I	K	S	C	S	V	V	A	H	I	R	Q	A	N	R	G	E	V	A	L	E	N	T	H	P	F	T	R	E	L	W	G	R	N	W	T	Y	A	H	N	G	Q	L	T	G	Y	K	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.																																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																							.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.
Template Sequence		I	Y	K	G	M	F	L	A	E	Q	L	T	T	F	Y	P	D	L	L	D	E	R	F	E	S	D	F	A	I	Y	H	Q	R	Y	S	T	N	T	F	P	T	W	P	L	A	Q	P	F	R	.	.	.	.	.	.	.	.	M	L	A	H	N	G	E	I	N	T	V	K	G	N	V	N	W	M	K	A	H	E	T
Template Known Secondary structure									G	G	G						G	G	G	G		T	T			B	S										S		S				G	G	G	S	S			S	.	.	.	.	.	.	.	.	S								T	T													T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
										116	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																		.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.											.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.											.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	S	L	E	T	G	N	F	R	P	V	.	.	G	E	T	D	S	E	K	A	F	C	W	L	L	H	K	L	T	Q	R	Y	P	R	T	P	G	N	M	A	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	Y	I	A	S	L	A	D	E	L	R	Q
Query Conservation		.	.	.	.	.	.	.	.											.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.											.	.														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																			.																																													.
Template Sequence		R	M	E	H	P	A	F	G	T	H	M	Q	D	L	K	P	V	I	G	V	G	L	S	D	S	G	S	L	D	T	V	F	E	.	V	M	V	R	A	G	R	T	A	P	M	V	K	M	M	L	V	P	Q	A	L	T	S	S	Q	T	T	P	D	N	H	K	A	L	I	Q	Y	C	N	S	V	M	E	P	.	W
Template Known Secondary structure		T				S	T	T	G	G	G						S	S	S		T	T													.					T	T											S							S	T	T	S															S			.
Template Predicted Secondary structure																																			.																																													.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.			240	.	.
Predicted Secondary structure																																																															.	.	.	.											.	.
Query SS confidence																																																															.	.	.	.											.	.
Query Sequence		K	G	V	F	N	M	L	L	S	D	G	R	Y	V	M	A	Y	C	S	T	N	L	H	W	I	T	R	R	A	P	F	G	V	A	T	L	L	D	Q	D	V	E	I	D	F	S	S	Q	T	T	P	N	D	V	V	T	V	I	A	T	Q	.	.	.	.	P	L	T	G	N	E	T	W	Q	K	.	.	I	M	P
Query Conservation																																																															.	.	.	.											.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	P	A	A	L	A	M	T	D	G	R	W	V	V	G	G	M	D	R	N	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	M	R	Y	T	I	T	T	D	G	L	I	I	G	G	S	E	T	G	M	V	K	I	D	E	T	Q	V	I	E	K	G	R	L	G	P
Template Known Secondary structure			S	S							S	S	S								T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								T	T	S						S	S	S		S	S				G	G	G									T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																					.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		243	.	.	.	.	.			.	250	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		G	E	W	R	L	F	.	.	C	L	G	E	R	V
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		G	E	M	I	A	V	D	L	Q	S	G	K	L	Y
Template Known Secondary structure		T							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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