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Job DescriptionQ47147
Confidence99.40%DateThu Jan 5 12:36:22 GMT 2012
Rank17Aligned Residues169
% Identity15%Templatec1q15A_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:cara; PDBTitle: carbapenam synthetase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90.........100.........110.........120.
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Query Sequence  GKGCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETGN.
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Template Sequence  NSFCVVYKGS. . . . . DTDINNIQRDFDGKGEALSNGYLFI. . . . . EQNGHYQKCEMERGTAYL. . IGSLYNRTFLIGLAG
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T

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   3......10.. .......20.........30....... ..40.........50..... ....60.........70
 
   122.......130.........140.........150.........160.........170........ .180....... ..190...
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Query Sequence  . . . FRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRQKGVFNMLLSD. GRYVMAYCS. . . . TNLHWI
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Template Sequence  VWEGEAYLANDAELLALLFTRLGANALALAE. . . . . . . . . . . . . . . . . . . . GDFCFFIDEPNGELTVITESRGFSPVHVV
Template Known Secondary structure  TT
GGGGG


GGGGGG

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   71........80.........90.........100. ........110.........120.........130
 
   194.. ...200.........210.........220.........230.........240.........250..
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Query Sequence  TRR. . . . . . . . . . . . APFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGE
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Template Sequence  QGKKAWMTNSLKLVTAAEGEGALWFEEEALVCQSLMRAD. . . . . . . . . TYTPVKNAQRLKPGAVHVLTHDS
Template Known Secondary structure  SSSS

TTSS
B

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SBTT

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   131........140.........150.........160......... 170.........180.........190..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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