Job Description Q47147 Confidence 99.46% Date Thu Jan 5 12:36:22 GMT 2012 Rank 16 Aligned Residues 178 % Identity 20% Template c1lm1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin-dependent glutamate synthase; PDBTitle: structural studies on the synchronization of catalytic centers in2 glutamate synthase: native enzyme Resolution 2.80 Å

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		48	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure												.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	K	D	P	Q	P	S	F	N	.	S	P	I	A	K	L	V	Q	D	Y	P	I	K	S	C	S	V	V	A	H	I	R	Q	A	N	R	G	E	V	A	L	E	N	T	H	P	F	T	R	E	L	W	G	R	N	W	T	Y	A	H	N	G	Q	L	T	G	Y	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																							.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.
Template Sequence		V	Y	K	G	M	V	R	S	I	I	L	G	E	F	Y	L	D	L	K	N	P	G	Y	T	S	N	F	A	V	Y	H	R	R	F	S	T	N	T	M	P	K	W	P	L	A	Q	P	M	R	.	.	.	.	.	.	.	.	L	L	G	H	N	G	E	I	N	T	L	L	G	N	I	N	W	M	A	A	R	E	K
Template Known Secondary structure						S			G	G	G					B	S	G	G	G	S	T	T			B	S										S	S	S				G	G	G	S	S			S	.	.	.	.	.	.	.	.	S								S	S												G	G
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.									.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
										115	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.														.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.												.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.												.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	K	S	L	E	T	G	N	F	R	P	V	.	.	G	E	T	D	S	E	K	A	F	C	W	L	L	H	K	L	T	Q	R	Y	P	R	T	P	G	N	M	A	A	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	I	A	S	L	A	D	E	L	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.												.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.												.	.														.																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																																				.
Template Sequence		E	L	E	V	S	G	W	T	K	A	E	L	E	A	L	T	P	I	V	N	Q	A	N	S	D	S	Y	N	L	D	S	A	L	E	.	L	L	V	R	T	G	R	S	P	L	E	A	A	M	I	L	V	P	E	A	Y	K	N	Q	P	A	L	K	D	Y	P	E	I	S	D	F	H	D	Y	Y	S	G	L	Q	E
Template Known Secondary structure		G				S	S							G	G	G						T	T	S												.					T	T											S					S	S		G	G	G	T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.			240
Predicted Secondary structure																																																																	.	.	.	.											.	.
Query SS confidence																																																																	.	.	.	.											.	.
Query Sequence		R	Q	K	G	V	F	N	M	L	L	S	D	G	R	Y	V	M	A	Y	C	S	T	N	L	H	W	I	T	R	R	A	P	F	G	V	A	T	L	L	D	Q	D	V	E	I	D	F	S	S	Q	T	T	P	N	D	V	V	T	V	I	A	T	Q	.	.	.	.	P	L	T	G	N	E	T	W	Q	K	.	.	I
Query Conservation																																																																	.	.	.	.											.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	W	D	G	P	A	L	L	V	F	S	D	G	K	I	V	G	A	G	L	D	R	N	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	A	R	Y	C	I	T	K	D	D	Y	I	V	L	G	S	E	A	G	V	V	D	L	P	E	V	D	I	V	E	K	G	R	L
Template Known Secondary structure					S									S	S								S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								T	T							S	S	S	T	T	S				G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.																					350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		241	.	.	.	.	.	.	.			.	250	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		M	P	G	E	W	R	L	F	.	.	C	L	G	E	R	V
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		A	P	G	Q	M	I	A	V	D	L	A	E	Q	K	I	L
Template Known Secondary structure			T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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