Job Description Q47147 Confidence 99.87% Date Thu Jan 5 12:36:22 GMT 2012 Rank 9 Aligned Residues 181 % Identity 17% Template c1ct9D_ PDB info PDB header:ligase Chain: D: PDB Molecule:asparagine synthetase b; PDBTitle: crystal structure of asparagine synthetase b from2 escherichia coli Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	L	L	G	M	S	A	N	V	P	T	D	I	C	F	S	F	T	G	L	V	Q	R	G	G	G	T	G	P	H	K	D	G	W	G	I	T	F	Y	E	G	K	G	C	R	T	F	K	D	P	Q	P	S	F	N	S	P	I	A	K	L	V	Q	D	Y	P	I	K	S	C	S	V	V	A	H	I	R	Q	A
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	I	F	G	V	F	D	I	K	T	D	A	V	E	L	R	K	K	A	L	E	L	S	R	L	M	R	H	R	G	P	D	W	S	G	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D	N	A	I	L	A	H	E	R	L	S
Template Known Secondary structure									S			S															T	T	G	G	G			S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																														.	40	.	.	.	.	.	.	.	.	.	50	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		N	R	G	E	V	A	L	E	N	T	H	P	F	T	R	E	L	W	G	R	N	W	T	Y	A	H	N	G	Q	L	T	G	Y	K	S	L	E	T	G	N	.	.	.	F	R	P	V	G	E	T	D	S	E	K	A	F	C	W	L	L	H	K	L	T	Q	R	Y	P	R	T	P	G	N	M	A	A	V	F	K	Y
Query Conservation																																										.	.	.
Alig confidence								.	.							.	.																									.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.							.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	D	V	N	A	.	.	G	A	Q	P	L	Y	.	.	N	Q	Q	K	T	H	V	L	A	V	N	G	E	I	Y	N	H	Q	A	L	R	A	E	Y	G	D	R	Y	Q	F	Q	T	G	S	D	C	E	V	I	L	A	L	Y	Q	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S	T	T	T	.	.			S	S			.	.		S	S	S											T	T									T	T	T					S			T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.							.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.			.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		I	A	S	L	A	D	E	L	R	Q	K	G	V	F	N	M	L	L	S	D	G	R	Y	V	M	A	Y	C	S	T	N	L	H	W	I	T	R	R	A	P	F	G	V	A	T	L	L	D	Q	D	V	E	I	D	F	S	S	Q	T	T	P	N	D	V	V	T	V	I	A	T	Q	P	.	.	.	L	T	G	N	E
Query Conservation																																																																										.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	E	F	L	D	D	L	Q	G	M	F	A	F	A	L	Y	D	S	E	K	D	A	Y	L	I	G	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	G	I	I	P	L	Y	M	G	Y	D	E	H	G	Q	L	Y	V	A	S	E	M	K	A	L	V	P	V	C	R
Template Known Secondary structure		T	T	T	T	G	G	G												T	T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	S								T	T							S	S	G	G	G	T	T	T	T		S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	Q	K	I	M	P	G	E	W	R	L	F	C	L	G	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	K	E	F	P	A	G	S	Y	L	W	S	Q	D	G	E	I
Template Known Secondary structure								T	T					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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