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Job DescriptionP0AE18
Confidence100.00%DateThu Jan 5 11:22:16 GMT 2012
Rank12Aligned Residues241
% Identity17%Templatec3l24A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:xaa-pro dipeptidase; PDBTitle: crystal structure of the nerve agent degrading2 organophosphate anhydrolase/prolidase in complex with3 inhibitors
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHG
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Template Sequence  HRA. YKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLATQHSE. . . . . . . NDNPYGNIVALNENCAILHY
Template Known Secondary structure  T.S

TT

T

G.......GGSSS

GGGGG
TT
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   156.. .160.........170.........180.........190.........200....... ..210.........220.......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  IPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE
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Template Sequence  THFDRVAPATHRSFLIDAGANFNGYAADITRTYDFT. GEGEFAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRVAQT
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TTSS.S
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   228.230.........240.........250.........260... ......270.........280.........290.........300......
 
   161... .....170.........180.........190.........200.........210.........220.
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Query Sequence  GFSV. . . . . . . . . . . . . . . . . . . VREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGW
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Template Sequence  LSDFNIVDLSADEIVAKGITSTFFPHGLGHHIGLQVHDVGGFM. . . ALRCTRKIEANQVFTIEPGLYFIDSLLGDLAATD
Template Known Secondary structure  TTSBSS
TT
GGGT

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SSSSS



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TT
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TSG
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   307..310.........320.........330.........340......... 350.........360.........370.........380...
 
   222.... ...230.........240.........250...
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Query Sequence  TVKTK. . . . . . . . DRSLSAQYEHTIVVTDNGCEILTLRKD
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Template Sequence  NNQHINWDKVAELKPFGGIRIEDNIIVHEDSLENMTRELR
Template Known Secondary structure  GGGGB
GGG

B
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   399400.........410.........420.........430........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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