Phyre 2 alignment of P0AE18 with c3fm3B

Job Description P0AE18
Confidence 100.00% Date Thu Jan 5 11:22:16 GMT 2012

Rank 31 Aligned Residues 241

% Identity 22% Template c3fm3B_

PDB info PDB header:hydrolase Chain: B: PDB Molecule:methionine aminopeptidase 2; PDBTitle: crystal structure of an encephalitozoon cuniculi methionine2 aminopeptidase type 2

Resolution 2.18 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	I	K	T	P	E	D	I	E	K	M	R	V	A	G	R	L	A	A	E	V	L	E	M	I	E	P	Y	V	K	P	G	V	S	T	G	E	L	D	R	I	C	N	D	Y	I	V	N	E	Q	H	A	V	S	A	C	L	G	Y	H	G	Y	P	K	S	V	C	I	S	I	N	E	V	V	C	H	G	I	P	D
Query Conservation
Alig confidence																																																							.	.								.	.
Template Conservation																																																							.	.								.	.
Template Sequence	N	F	T	E	S	D	I	L	Q	D	A	R	R	A	A	E	A	H	R	R	A	R	Y	R	V	Q	S	I	V	R	P	G	I	T	L	L	E	I	V	R	S	I	E	D	S	T	R	T	L	L	K	G	E	R	.	.	N	N	G	I	G	F	P	.	.	A	G	M	S	M	N	S	C	A	A	H	Y	T	V	N
Template Known Secondary structure																											T	T			T	T		B																T	T	T	S	G	.	.	G	G	G					.	.						T	T
Template Predicted Secondary structure																																																							.	.								.	.
Template SS confidence
	38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

				84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure	.	.	.
Query SS confidence	.	.	.
Query Sequence	.	.	.	D	A	K	L	L	K	D	G	D	I	V	N	I	D	V	T	V	I	K	D	G	F	H	G	D	T	S	K	M	F	I	V	G	K	P	T	I	M	G	E	R	L	C	R	I	T	Q	E	S	L	Y	L	A	L	R	M	V	K	P	G	I	N	L	R	E	I	G	A	A	I	Q	K	F	V	E	A	E
Query Conservation	.	.	.
Alig confidence	.	.	.																																		.	.	.
Template Conservation																																					.	.	.
Template Sequence	P	G	E	Q	D	I	V	L	K	E	D	D	V	L	K	I	D	F	G	T	H	S	D	G	R	I	M	D	S	A	F	T	V	A	F	K	.	.	.	E	N	L	E	P	L	L	V	A	A	R	E	G	T	E	T	G	I	K	S	L	G	V	D	V	R	V	C	D	I	G	R	D	I	N	E	V	I	S	S	Y
Template Known Secondary structure	T	T					B			T	T												T	T													.	.	.	G	G	G																				T	T		B													T	T
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
	114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

										161	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.															.																																																	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.															.																																																	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	G	F	S	V	V	R	E	Y	C	G	H	G	I	G	.	R	G	F	H	E	E	P	Q	V	L	H	Y	D	S	R	E	T	N	V	V	L	K	P	G	M	T	F	T	I	E	P	M	V	N	A	G	K	K	E	I	R	T	M	K	D	G	W	T	.	.	.	.	.	.	.	.
Query Conservation	.	.	.	.	.	.	.	.	.															.																																																	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.															.													.																																				.	.	.	.	.	.	.	.
Template Conservation																																					.
Template Sequence	E	V	E	I	G	G	R	M	W	P	I	R	P	I	S	D	L	H	G	H	S	I	S	Q	F	R	I	H	G	G	I	S	I	P	A	V	.	N	N	R	D	T	T	R	I	K	G	D	S	F	Y	A	V	E	T	F	A	T	T	G	K	G	S	I	D	D	R	P	P	C	S	H	F	V	L	N	T	Y	K	S
Template Known Secondary structure					T	T									T	T							B	T	T	B	S			S					S	S	.							B			S	S											S	S		S						S									S	S
Template Predicted Secondary structure																																					.
Template SS confidence
	191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

																																																										223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	T	K	D	R	S	L	S	A	Q	Y	E	H	T	I	V	V	T	D	N	G	C
Query Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	R	K	L	F	N	K	D	L	I	K	V	Y	E	F	V	K	D	S	L	G	T	L	P	F	S	P	R	H	L	D	Y	Y	G	L	V	K	G	G	S	L	K	S	V	N	L	L	T	M	M	G	L	L	T	P	Y	P	P	L	N	D	I	D	G	C	K	V	A	Q	F	E	H	T	V	Y	L	S	E	H	G	K
Template Known Secondary structure																			T	T	T	S		B							T	T	T		S	T	T		S										T	T	S										S	T	T														T	T
Template Predicted Secondary structure
Template SS confidence
	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

	246	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	I	L	T	L	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence	E	V	L	T	R	G	D
Template Known Secondary structure			S	S			S
Template Predicted Secondary structure
Template SS confidence
	350	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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