Job Description P0AE18 Confidence 100.00% Date Thu Jan 5 11:22:16 GMT 2012 Rank 25 Aligned Residues 252 % Identity 23% Template c2v6cA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:proliferation-associated protein 2g4; PDBTitle: crystal structure of erbb3 binding protein 1 (ebp1) Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		S	I	K	T	P	E	D	I	E	K	M	R	V	A	G	R	L	A	A	E	V	L	E	M	I	E	P	Y	V	K	P	G	V	S	T	G	E	L	D	R	I	C	N	D	Y	I	V	N	E	Q	H	A	V	S	A	C	L	G	Y	H	G	Y	P	K	S	.	.	V	C	I	S	I	N	E	V	V	C	H	G	I
Query Conservation																																																																			.	.
Alig confidence																																																																			.	.
Template Conservation
Template Sequence		T	I	A	E	D	L	V	V	T	K	Y	K	M	G	G	D	I	A	N	R	V	L	R	S	L	V	E	A	S	S	S	G	V	S	V	L	S	L	C	E	K	G	D	A	M	I	M	E	E	T	G	K	I	F	K	K	E	K	E	M	K	K	G	I	A	F	P	T	S	I	S	V	N	N	C	V	C	H	F	S
Template Known Secondary structure			T	T	S																							T	T			T	T		B																	T	T	S		T	T		T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		82				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure			.	.	.																																					.	.	.	.	.
Query SS confidence			.	.	.																																					.	.	.	.	.
Query Sequence		P	.	.	.	D	D	A	K	L	L	K	D	G	D	I	V	N	I	D	V	T	V	I	K	D	G	F	H	G	D	T	S	K	M	F	I	V	G	K	P	.	.	.	.	.	T	I	M	G	E	R	L	C	R	I	T	Q	E	S	L	Y	L	A	L	R	M	V	K	P	G	I	N	L	R	E	I	G	A	A	I
Query Conservation			.	.	.																																					.	.	.	.	.
Alig confidence			.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		P	L	K	S	D	Q	D	Y	I	L	K	E	G	D	L	V	K	I	D	L	G	V	H	V	D	G	F	I	A	N	V	A	H	T	F	V	I	G	V	A	Q	G	T	Q	V	T	G	R	K	A	D	V	I	K	A	A	H	L	C	A	E	A	A	L	R	L	V	K	P	G	N	Q	N	T	Q	V	T	E	A	W
Template Known Secondary structure				S	S	S				B			T	T												T	T											T	T			T	T			B		T																					S	T	T		B
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																								.															.	.	.	.	.																																			.	.	.	.
Query SS confidence																								.															.	.	.	.	.																																			.	.	.	.
Query Sequence		Q	K	F	V	E	A	E	G	F	S	V	V	R	E	Y	C	G	H	G	I	G	R	.	G	F	H	E	E	P	Q	V	L	H	Y	D	S	R	.	.	.	.	.	E	T	N	V	V	L	K	P	G	M	T	F	T	I	E	P	M	V	N	A	G	K	K	E	I	R	T	M	K	D	G	W	T	V	.	.	.	.
Query Conservation																								.															.	.	.	.	.																																			.	.	.	.
Alig confidence																								.															.	.	.	.	.																																			.	.	.	.
Template Conservation
Template Sequence		N	K	V	A	H	S	F	N	C	T	P	I	E	G	M	L	S	H	Q	L	K	Q	H	V	I	D	G	E	K	T	I	I	Q	N	P	T	D	Q	Q	K	K	D	H	E	K	A	E	F	E	V	H	E	V	Y	A	V	D	V	L	V	S	S	G	E	G	K	A	K	D	A	G	Q	R	T	T	I	Y	K	R	D
Template Known Secondary structure								T	T					T	T							B	T	T	B	S	S		S	S				S	S									S				B			T	T											S	S								S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
																																																												224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	K	D	R	S	L	S	A	Q	Y	E	H	T	I	V	V	T	D	N	G	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	K	Q	Y	G	L	K	M	K	T	S	R	A	F	F	S	E	V	E	R	R	F	D	A	M	P	F	A	L	R	A	F	E	D	E	K	K	A	R	M	G	V	V	E	C	A	K	H	E	L	L	Q	P	F	N	V	L	Y	E	R	E	G	E	F	V	A	Q	F	K	F	T	V	L	L	M	P	N	G	P
Template Known Secondary structure		T	T							S														T	T	T	S				G	G	G	S	S															T	T	S											T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		246	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	L	T	L	R	K	D	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	R	I	T	S	G	P	F	E	P
Template Known Secondary structure											G
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions