Job Description P0AFY2 Confidence 51.64% Date Thu Jan 5 11:27:33 GMT 2012 Rank 45 Aligned Residues 68 % Identity 13% Template c3td4D_ PDB info PDB header:membrane protein,peptide binding protein Chain: D: PDB Molecule:outer membrane protein omp38; PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate Resolution 1.79 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.												.
Query SS confidence																																												.	.	.	.	.	.	.	.	.												.
Query Sequence		Y	R	T	G	V	I	N	Q	Y	Y	R	Y	R	I	Q	G	A	I	N	A	Y	N	S	G	K	V	N	Y	L	L	L	S	G	D	N	A	L	Q	S	Y	N	E	.	.	.	.	.	.	.	.	.	P	M	T	M	R	K	D	L	I	A	A	.	G	V	D	P	S	D	I	V	L	D	Y	A	G	F	R
Query Conservation																																												.	.	.	.	.	.	.	.	.												.
Alig confidence																																												.	.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		T	N	K	S	N	I	K	D	Q	Y	K	P	E	I	A	K	V	A	E	K	L	S	E	Y	P	N	A	T	A	R	I	E	G	H	T	D	N	T	G	P	R	K	L	N	E	R	L	S	L	A	R	A	N	S	V	K	S	A	L	V	N	E	Y	N	V	D	A	S	R	L	S	T	Q	G	F	A	W	D
Template Known Secondary structure		T	T						G	G	G														S	T	T											S		S																							T	T				G	G	G							T	T	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions