Job Description P0AFY2 Confidence 29.13% Date Thu Jan 5 11:27:33 GMT 2012 Rank 80 Aligned Residues 126 % Identity 13% Template c3nwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridylate kinase; PDBTitle: structure and allosteric regulation of the uridine monophosphate2 kinase from mycobacterium tuberculosis Resolution 2.54 Å

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		47	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																							.	100	.	.	.
Predicted Secondary structure												.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	V	V	L	G	T	A	K	Y	.	Y	R	T	G	V	I	N	Q	Y	Y	R	Y	R	I	Q	G	A	I	N	A	Y	N	S	G	K	V	N	Y	L	L	L	S	G	D	N	A	L	Q	S	Y	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	T	M	R
Query Conservation												.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	L	K	L	G	G	E	M	F	G	G	G	Q	V	G	L	D	P	D	V	V	A	Q	V	A	R	Q	I	A	D	V	V	R	G	G	V	Q	I	A	V	V	I	G	G	G	N	F	F	R	G	A	Q	L	Q	Q	L	G	M	E	R	T	R	S	D	Y	M	G	M	L	G	T	V	M	N	S	L	A	L	Q
Template Known Secondary structure								S	T	T	S	S	T	T	S	S	S																			T	T										T	T	T			S	S						T	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																.																																		.	.	.	.	.	.
Query SS confidence																.																																		.	.	.	.	.	.
Query Sequence		K	D	L	I	A	A	G	V	D	P	S	D	I	V	.	L	D	Y	A	G	F	R	T	L	D	S	I	V	R	T	R	K	V	F	D	T	N	D	F	I	I	I	T	Q	R	F	H	C	.	.	.	.	.	.	E	R	A	L	F	I	A	L	H	M	G	I	Q	A	Q	C	Y	A	V	P	S	P
Query Conservation																.																																		.	.	.	.	.	.
Alig confidence																.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	L	E	K	E	G	I	V	T	R	V	Q	T	A	I	T	M	G	Q	V	A	E	P	Y	L	P	L	R	A	V	R	H	L	E	K	G	R	V	V	I	F	G	A	G	M	G	L	P	Y	F	S	T	D	T	T	A	A	Q	R	A	L	E	I	G	A	D	V	V	L	M	A	K	A	V	D
Template Known Secondary structure							T	T								S	S			T	T	T	S														T	T							S	T	T	S		T	T															T		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions