Job Description P0AFY2 Confidence 25.18% Date Thu Jan 5 11:27:33 GMT 2012 Rank 94 Aligned Residues 99 % Identity 9% Template c3hcwB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:maltose operon transcriptional repressor; PDBTitle: crystal structure of probable maltose operon transcriptional repressor2 malr from staphylococcus areus Resolution 2.20 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140
Predicted Secondary structure																																.																																											.	.	.
Query SS confidence																																.																																											.	.	.
Query Sequence		Y	Y	R	Y	R	I	Q	G	A	I	N	A	Y	N	S	G	K	V	N	Y	L	L	L	S	G	D	N	A	L	Q	.	S	Y	N	E	P	M	T	M	R	K	D	L	I	A	A	G	V	D	P	S	D	I	V	L	D	Y	A	G	F	R	T	L	D	S	I	V	R	T	R	K	V	F	.	.	.	D	T	N	D
Query Conservation																																.																																											.	.	.
Alig confidence																																.																																											.	.	.
Template Conservation
Template Sequence		N	I	L	A	S	E	N	L	T	R	H	V	I	E	Q	G	V	D	E	L	I	F	I	T	E	K	G	N	F	E	V	S	K	D	R	I	Q	G	F	E	T	V	A	S	Q	F	N	L	D	Y	Q	I	I	E	T	S	N	E	R	E	V	I	L	N	Y	M	Q	N	L	H	T	R	L	K	D	P	N	I	K	Q
Template Known Secondary structure																T			S								S	S																			T	T										S																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	I	I	T	Q	R	F	H	C	E	R	A	L	F	I	A	L	H	M	G	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	I	S	L	D	A	M	L	H	L	A	I	L	S	V	L	Y	E	L	N	I	E
Template Known Secondary structure						S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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