Job Description P0AFY2 Confidence 99.94% Date Thu Jan 5 11:27:33 GMT 2012 Rank 1 Aligned Residues 129 % Identity 11% Template c3ca8B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ydcf; PDBTitle: crystal structure of escherichia coli ydcf, an s-adenosyl-l-methionine2 utilizing enzyme Resolution 1.80 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		T	V	L	G	L	D	R	W	M	S	W	K	T	A	P	Y	I	Y	D	E	L	Q	D	L	P	Y	R	Q	V	G	V	V	L	G	T	A	K	Y	Y	R	T	G	V	I	N	Q	Y	Y	R	Y	R	I	Q	G	A	I	N	A	Y	N	S	G	K	V	N	Y	L	L	L	S	G	D	N	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																					.	.																		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																					.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	D	A	I	N	V	I	G	Q	W	L	A	Q	D	D	F	S	G	.	.	E	V	P	Y	Q	A	D	C	V	I	L	A	G	N	A	V	M	.	.	.	.	.	.	.	.	.	.	.	P	T	I	D	A	A	C	K	I	A	R	D	Q	Q	I	P	L	L	I	S	G	G	I	G	H	S	T	T	F	L	Y
Template Known Secondary structure																	T	T	T	T	.	.	T						S								S			.	.	.	.	.	.	.	.	.	.	.														T									S	S	T	T
Template Predicted Secondary structure																					.	.																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
														92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																			.																												.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																			.																												.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	L	Q	S	Y	N	E	P	M	T	M	R	K	D	L	I	A	A	.	G	V	D	P	S	D	I	V	L	D	Y	A	G	F	R	T	L	D	S	I	V	R	T	R	K	V	F	.	.	.	.	.	D	T	N	D	F	I	I	I	T	Q	R	F	H	C	E	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																			.																												.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																			.																												.	.	.	.	.
Template Conservation
Template Sequence		S	A	I	A	Q	H	P	H	Y	N	T	I	R	T	T	G	R	A	E	A	T	I	L	A	D	I	A	H	Q	F	W	H	I	P	H	E	K	I	W	I	E	D	Q	S	T	N	C	G	E	N	A	R	F	S	I	A	L	L	N	Q	A	V	E	R	V	H	T	A	I	V	V	Q	D	P	T	M	Q	R	R	T
Template Known Secondary structure						T		T	T	G	G	G	S			T	T	S													T	T				G	G	G									S														T		S	S			S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	I	A	L	H	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	T	F	R	R	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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