Job Description P0AFY2 Confidence 57.29% Date Thu Jan 5 11:27:33 GMT 2012 Rank 37 Aligned Residues 93 % Identity 10% Template c3brqA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator ascg; PDBTitle: crystal structure of the escherichia coli transcriptional repressor2 ascg Resolution 2.00 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.																																							.
Query SS confidence																														.																																							.
Query Sequence		Q	G	A	I	N	A	Y	N	S	G	K	V	N	Y	L	L	L	S	G	D	N	A	L	Q	S	Y	N	E	.	P	M	T	M	R	K	D	L	I	A	A	G	V	D	P	S	D	I	V	L	D	Y	A	G	F	R	T	L	D	S	I	V	R	T	R	K	V	F	.	D	T	N	D	F	I	I	I	T	Q	R	F
Query Conservation																														.																																							.
Alig confidence																														.																																							.
Template Conservation
Template Sequence		N	A	V	A	E	L	I	N	A	G	H	Q	E	I	A	F	L	T	G	S	X	D	S	P	T	S	I	E	R	L	A	G	Y	K	D	A	L	A	Q	H	G	I	A	L	N	E	K	L	I	A	N	G	K	W	T	P	A	S	G	A	E	G	V	E	X	L	L	E	R	K	F	S	A	L	V	A	S	N	D	D
Template Known Secondary structure										T	T			S								T	T																	T	T	T					G	G	G						S	S													T				S					S	S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C	E	R	A	L	F	I	A	L	H	M	G	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	A	I	G	A	X	K	A	L	H	E	R	G	V	A
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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