Job Description P0AFY2 Confidence 26.29% Date Thu Jan 5 11:27:33 GMT 2012 Rank 89 Aligned Residues 60 % Identity 23% Template c2zvyB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form ii) Resolution 1.75 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.															.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	T	G	V	I	N	Q	Y	Y	R	Y	R	I	Q	G	A	I	N	A	Y	N	S	G	K	V	N	Y	L	L	L	S	G	D	N	A	L	Q	S	Y	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	T	M	R	K	D	L	I	A	A	G	V	D	P	S	D	I	V
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		T	G	S	A	E	V	E	P	Y	M	R	D	I	L	R	A	I	A	P	V	L	N	G	I	P	N	.	R	I	S	L	A	G	H	T	D	D	F	P	Y	A	N	G	E	K	G	Y	S	N	W	E	L	S	A	D	R	A	N	A	S	R	R	E	L	V	A	G	G	L	D	N	G	K	V	L
Template Known Secondary structure		T	T			S	B																T	T	S	S		.											S		G	G	G	S	S	S	S	S																				T	T			T	T
Template Predicted Secondary structure																												.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions