Job Description P76072 Confidence 14.19% Date Thu Jan 5 12:18:11 GMT 2012 Rank 64 Aligned Residues 43 % Identity 26% Template c3njqB_ PDB info PDB header:viral protein/inhibitor Chain: B: PDB Molecule:orf 17; PDBTitle: crystal structure of kaposi's sarcoma-associated herpesvirus protease2 in complex with dimer disruptor Resolution 2.00 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	L	V	E	G	F	P	P	S	H	A	G	T	I	T	V	Y	E	D	S	Q	P	G	T	L	N	D	F	L	G	A	M	T	E	D	D	A	R	P	E	A	L	R	R	F	E	L	M	V	E	E	V	A	R	N	A	S	A	V	A	Q
Query Conservation
Alig confidence										.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	L	C	A	L	G	R	.	.	.	R	R	G	T	V	A	V	Y	G	H	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	W	V	V	S	R	F	S	S	V	S	K	S	E	R	A	H	I	L	Q	H	V	S
Template Known Secondary structure						S	S	S		.	.	.	S	S	S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T		S	S	S
Template Predicted Secondary structure										.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.																		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions