Return to main results Retrieve Phyre Job Id

Job DescriptionP77165
Confidence31.30%DateThu Jan 5 12:25:51 GMT 2012
Rank111Aligned Residues36
% Identity31%Templatec3kbgA_
PDB info PDB header:ribosomal proteinChain: A: PDB Molecule:30s ribosomal protein s4e; PDBTitle: crystal structure of the 30s ribosomal protein s4e from2 thermoplasma acidophilum. northeast structural genomics3 consortium target tar28.
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.. .......100.........110.......
Predicted Secondary structure 







....















Query SS confidence 















. . . .
























Query Sequence  DTRTTLLDTLRENLHL. . . . IGTKKGCDHGQCGACTVLVNGRRLN
Query Conservation   
   


 

  


....



 

  
 









  
 
Alig confidence 















....










.....








Template Conservation    



 
 


 
  
 
 


  

    .....
 





 
Template Sequence  DQSVTLLSIIRDYLKLSDKEREAARILANGL. . . . . VKVDGKTVR
Template Known Secondary structure 
S
TTT
GGGTT
.....TT

Template Predicted Secondary structure 










.....

Template SS confidence 












































   35....40.........50.........60..... ....70....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions