Return to main results Retrieve Phyre Job Id

Job DescriptionP77165
Confidence98.50%DateThu Jan 5 12:25:51 GMT 2012
Rank36Aligned Residues94
% Identity30%Templatec1c4cA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90... ......100.........110... ......120.........130.....
Predicted Secondary structure 











......













.




Query SS confidence 






























. . . . . .



















.





















Query Sequence  LTLKVNGKTEQLEVDTRTTLLDTLRENLHLI. . . . . . GTKKGCDHGQCGACTVLVNG. RRLNACLTLAVMHQGAEITTIE
Query Conservation 
 
 


    
 
 
   


 

  



......


 

  
 









.  
 


 

    
  
 


Alig confidence 








..













.




......



















.









..







.
Template Conservation 
 
 


  ..
 
  
 





 .  

 

 

    
    
 

 
 


 
  
  

 
 
..  

 
 
. 
Template Sequence  KTIIINGVQ. . FNTDEDTTILKFAR. DNNIDISALCFLNNCNNDINKCEICTVEVEGTGLVTACDTLI. . EDGMIINT. N
Template Known Secondary structure  TT..



B.TS




SS
BTTB

SSS


TTTTTTTS
B
..
TT
S.S
Template Predicted Secondary structure 


..




.





























..



.
Template SS confidence 















































































   2.......10 .........20.... .....30.........40.........50.........60...... ...70.... .
 
   136...140.........150.........160..
Predicted Secondary structure 


















Query SS confidence 


























Query Sequence  GLGSPDNLHPMQAAFIKHDGFQCGYCT
Query Conservation 

     




 

    
 





Alig confidence 


























Template Conservation 
  
   

  

 

  

 

  
 
Template Sequence  SDAVNEKIKSRISQLLDIHEFKCGPCN
Template Known Secondary structure 
STT



TTT
T
Template Predicted Secondary structure 










Template SS confidence 


























   76...80.........90.........100..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions