Job Description P15723 Confidence 100.00% Date Thu Jan 5 11:34:52 GMT 2012 Rank 4 Aligned Residues 313 % Identity 15% Template d2heka1 SCOP info HD-domain/PDEase-like HD-domain/PDEase-like HD domain Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		R	I	I	N	S	P	A	I	R	R	L	Q	Q	K	T	Q	V	F	P	.	.	L	E	R	N	A	A	V	R	T	R	L	T	H	S	M	E	V	Q	Q	V	G	R	Y	I	A	K	E	I	L	S	R	L	K	E	L	K	L	L	E	A	Y	G	L	D	E	L	T	G	P	F	E	S	I	V	E	M	S	C	L
Query Conservation																					.	.
Alig confidence																					.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	I	D	S	F	P	F	Q	R	L	R	Y	V	K	Q	L	G	L	A	Y	L	V	F	P	S	A	Q	H	T	R	F	E	H	S	L	G	V	Y	H	I	T	E	R	I	C	E	S	L	K	V	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	L	V	K	L	A	G	L
Template Known Secondary structure					T	S					G	G	G	G	S	B	T	T	T	T	G	G	G	T	S	T	T				B																				T		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																			.	.	.	.	.	.	80	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.								.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		M	H	D	I	G	N	P	P	F	G	H	F	G	E	A	A	I	N	D	W	F	R	Q	R	L	H	P	E	D	A	E	S	Q	P	L	T	D	D	R	C	S	V	A	A	L	R	L	R	D	G	E	E	P	L	N	E	L	R	R	.	.	.	.	.	.	.	K	I	R	Q	D	L	C	H	F	E	G	N	A	Q
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	H	D	L	G	H	P	P	F	S	H	T	T	E	V	L	L	P	R	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	E	D	F	T	E	R	V	I	K	E	T	E	I	Y	E	I	L	K	Q	D	Y	S	H	E	D	I	E	R	L	V	R	I	T	L	G	K	P	E	D	E
Template Known Secondary structure		T	T	T	T	T			S	S	S	S						S	T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												S								T	T	S														T			S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		189	190	.	.	.	.	.	.	.												.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Query Sequence		G	I	R	L	V	H	T	L	M	.	.	.	.	.	.	.	.	.	.	.	R	M	N	L	T	W	A	Q	V	G	G	I	L	K	Y	T	R	P	A	W	W	R	G	E	T	P	E	T	H	H	Y	L	M	K	K	P	G	Y	Y	L	S	E	E	A	Y	I	A	R	L	R	K	E	L	N	L	.	.	A	L	Y
Query Conservation											.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																														.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		E	E	K	L	L	S	E	I	I	T	G	E	F	G	S	D	R	M	D	Y	L	R	R	D	A	Y	F	C	G	V	S	Y	G	F	F	D	Y	D	R	L	I	.	.	.	.	.	S	T	L	R	V	Y	E	N	K	V	V	V	D	E	S	G	L	R	A	L	E	N	F	L	I	S	R	Y	F	M	Y	V	Q	V
Template Known Secondary structure												S	T	T																T			S	S									.	.	.	.	.		T					T	T						G	G	G																		T
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		256	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.													.	.
Query SS confidence								.	.	.	.	.													.	.
Query Sequence		S	R	F	P	L	T	.	.	.	.	.	W	I	M	E	A	A	D	D	I	S	Y	C	.	.	V	A	D	L	E	D	A	V	E	K	R	I	F	T	V	E	Q	L	Y	H	H	L	H	E	A	W	G	Q	H	E	K	G	S	L	F	S	L	V	V	E	N	A	W	E	K	S	R	S	N	S	L	S	R	S	T
Query Conservation								.	.	.	.	.													.	.
Alig confidence								.	.	.	.	.													.	.											.	.	.
Template Conservation																																					.	.	.
Template Sequence		Y	F	H	K	V	V	R	I	L	S	I	H	L	V	E	F	L	K	K	L	I	S	Q	E	D	F	T	D	I	N	N	F	L	R	L	.	.	.	N	D	A	F	V	I	S	E	L	F	K	R	K	A	F	R	E	D	F	E	R	I	F	Q	R	K	H	F	K	T	L	L	S	T	E	N	Y	E	K	F	S	E
Template Known Secondary structure		T	T																			T	S	S				S	S	T					T		.	.	.													S	T	T									S	S										S
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	Q	F	F	M	Y	L	R	V	N	T	L	N	K	L	V	P	Y	A	A	Q	R	F	I	D	N	L	P	A	I	F	A	G	T	F	N	H	A	L	L	E	D	A	S	E	C	S	D	L	L	K	L	Y	K	N	V	A	V	K	H	V	F	S	H	P	D	V	E	R
Query Conservation
Alig confidence									.																																						.	.	.	.
Template Conservation									.																																						.	.	.	.
Template Sequence		T	K	E	R	L	L	E	.	K	F	P	Q	E	K	V	R	F	D	E	V	E	K	E	V	Y	G	G	N	I	Y	V	L	S	S	E	G	L	K	K	A	H	E	L	S	P	.	.	.	.	L	I	A	S	L	K	P	I	K	L	Y	R	I	Y	V	D	R	Q	L	W	E
Template Known Secondary structure									.		S		G	G	G										S			S							T	T											.	.	.	.																	T	T	T
Template Predicted Secondary structure									.																																						.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.					.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions