Job Description P15723 Confidence 99.88% Date Thu Jan 5 11:34:52 GMT 2012 Rank 7 Aligned Residues 223 % Identity 21% Template c3u1nC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:sam domain and hd domain-containing protein 1; PDBTitle: structure of the catalytic core of human samhd1 Resolution 3.10 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		R	I	I	N	S	P	A	I	R	R	L	Q	Q	K	T	Q	.	.	.	.	.	.	V	F	P	L	E	R	N	A	A	V	R	T	R	L	T	H	S	M	E	V	Q	Q	V	G	R	Y	I	A	K	E	I	L	S	R	L	K	E	L	K	L	L	E	A	Y	G	L	D	E	L	T	G	P	F	E	S	I	V	E
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.							.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	I	D	T	P	Q	F	Q	R	L	R	Y	I	K	Q	L	G	G	G	Y	Y	V	F	P	G	A	S	.	.	.	.	H	N	R	F	E	H	S	L	G	V	G	Y	L	A	G	C	L	V	H	A	L	G	E	K	Q	P	E	L	Q	I	S	E	.	.	.	.	.	.	.	.	.	R	D	V	L	C	V	Q
Template Known Secondary structure					S	S					G	G	G	G	S	B	T	T	G	G	G	T	T	T		T	T			.	.	.	.		B																								G	G	G					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.										.	.	.	.	.	.	200
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	C	L	M	H	D	I	G	N	P	P	F	G	H	F	G	E	A	A	I	N	D	W	F	R	Q	R	L	H	P	E	D	A	E	S	Q	P	L	T	D	D	R	C	S	V	A	A	L	R	L	R	D	G	E	E	P	L	N	E	L	R	R	K	I	R	Q	D	L	C	H	F	E	G	N	A	Q	G	I	R
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	G	L	C	H	D	L	G	H	G	P	F	S	H	X	F	D	G	R	F	I	P	L	A	R	P	E	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	T	H	E	Q	G	S	V	X
Template Known Secondary structure							T	T	T	T		B	T	T	B						T							T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																																										.	.	.	.	.	.	.	.	.
		192	.	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.										.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	H	T	L	.	.	.	.	.	.	.	.	.	.	M	R	M	N	L	T	W	A	Q	V	G	G	I	L	K	Y	.	.	.	.	.	.	.	.	.	T	R	P	A	W	W	R	G	E	T	P	E	T	H	H	Y	L	M	K	K	P	G	Y	Y	L	S	E	E	A	Y	I	A	R	L	R	K	E	L	N	L
Query Conservation							.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	F	E	H	L	I	N	S	N	G	I	K	P	V	X	E	Q	Y	G	L	I	P	E	E	D	I	C	F	I	K	E	Q	I	V	G	P	L	E	L	W	P	Y	K	G	R	P	E	N	K	S	F	L	Y	E	I	V	S	N	K	R	N	G	I	D	V	D	K	W	D	Y	F	A	R	D	C	H	H	L	G	I
Template Known Secondary structure										T	T								T	T																								S	S	S		G	G	G	G	G	G	G	G	S	S			T	T	T	S																	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.									.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.
Query Sequence		A	L	Y	S	R	F	P	L	T	W	I	M	E	A	A	.	.	.	.	.	.	.	.	D	D	I	S	Y	C	V	A	D	L	E	D	A	V	E	K	R	I	F	T	V	E	Q	L	Y	H	H	L	H	E	A	W	G	Q	H	E	K	G	S	L	F	S	L	V	V	E	N	A	W	E	K	S	R	S
Query Conservation																	.	.	.	.	.	.	.	.
Alig confidence					.	.											.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation					.	.																																		.	.	.	.	.
Template Sequence		Q	N	N	.	.	F	D	Y	K	R	F	I	K	F	A	R	V	C	E	V	D	N	E	L	R	I	C	A	R	D	K	E	V	G	N	L	Y	D	.	.	.	.	.	X	F	H	T	R	N	S	L	H	R	R	A	Y	Q	H	K	V	G	N	I	I	D	T	X	I	T	D	A	F	L	K	A	D	D
Template Known Secondary structure					.	.									T						S	S	S	S							G	G	G							.	.	.	.	.												T	T	T																	T	T	T	T
Template Predicted Secondary structure					.	.																																		.	.	.	.	.
Template SS confidence
		326	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.						.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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