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Job DescriptionP15723
Confidence100.00%DateThu Jan 5 11:34:52 GMT 2012
Rank1Aligned Residues387
% Identity32%Templatec3bg2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dgtp triphosphohydrolase; PDBTitle: crystal structure of deoxyguanosinetriphosphate triphosphohydrolase2 from flavobacterium sp. med217
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20. ........30.........40.........50.........60.........70.........80..
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Query Sequence  IDFRKKINWHRRYRSPQG. VKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAK
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Template Sequence  MNWEHLLSLKRQGDTAKRLRIEQDDTRLGFEVDYDRIIFSAPFRSLQDKTQVIP. . . TDFVHTRLTHSLEVSVVGRSLGR
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TT
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SGGG
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B
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   2.......10.........20.........30.........40.........50..... ....60.........70........
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  EILSRLKELKLLEAYGLDELTGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAALRL
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Template Sequence  MVGKKLLEKYPHLEQVYGYKFNDFGAIVAAAALAHDIGNPPFGHSGEKAIGEFFKNGY. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  STTT


TTTT

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   82.......90.........100.........110.........120.........130.........
 
   163......170.........180.........190....... ..200.........210.........220.........230.......
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Query Sequence  RDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLM. . . . . RMNLTWAQVGGILKYTRPAWWRGETPETHHYLMKKPGYYL
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Template Sequence  . . GKRYKDSLTAKEYQDLIKFEGNANGFKVLSQSKPGAQGGLRLSYATLGAFMKYPKES. . . . . . . . . . . . . . LKYGFFQ
Template Known Secondary structure  ..GGGGGGGS
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BTTBTTTT



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   140.........150.........160.........170.........180.........190...... ...200...
 
   238.240.........250.... .....260.........270.........280.........290.........300.........310...
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Query Sequence  SEEAYIARLRKELNLAL. . . . YSRFPLTWIMEAADDISYCVADLEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVE
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Template Sequence  SERALFEDVAQELGLLKRDVSWSRHPLAYLVEAADDICYTIIDFEDGINLGLIPEYNALQETSDR. . . . . . . . . . . . . . .
Template Known Secondary structure  GGT

B


BB


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   215....220.........230.........240.........250.........260.........270.........
 
   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  NAWEKSRSNSLSRSTEDQFFMYLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFSH
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Template Sequence  . . . . . . . . . . . . . . . . . . . VSYLRALAIGTLINESVDTFMKYEEEILAGTFDQSLIDKS. NYQAQITDIINLSIERIYNS
Template Known Secondary structure  ...................ST


S
TGGG
.TTTTTS
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   303......310.........320.........330.........340.. .......350.........360..
 
   394.....400.........410.........420.........430.........440.........450.........460.........470...
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Query Sequence  PDVERLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTRHRLAYVEAVSKLPSDSPEFPLWE
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Template Sequence  REVIEKEIAGYEILSTLLEARCRALDNNDTHYNQLIQQLL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AKS
Template Known Secondary structure  TTTS.....................................


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   363......370.........380.........390.........400.. ...
 
   474.....480.........490.........500...
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Query Sequence  YYYRCRLLQDYISGMTDLYAWDEYRRLMAV
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Template Sequence  LYENLIQICAEVSTMTDGKALRNYKKIKGL
Template Known Secondary structure  S
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   412.......420.........430.........440.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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