 |
Job Description | P0A7D7 | Confidence | 9.52% | Date | Thu Jan 5 11:05:25 GMT 2012 |
Rank | 28 | Aligned Residues | 41 |
% Identity | 20% | Template | c3r23B_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:d-alanine--d-alanine ligase; |
PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis
|
Resolution | 2.50 Å |
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | S | K | E | N | L | A | R | M | K | E | L | T | Y | K | A | N | D | V | L | K | K | L | F | D | D | A | G | L | I | L | V | D | F | K | L | E | F | G | L | Y | K | G | E | V | V | L | G | D |
Query Conservation |   |
  |   |   |
|
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|
|
|   |   |   |
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
| . | . | . | . |   |   |
|   |   |   |
|
|   |   |   | . | . | . | . |   |   |
|   |   |   |
|
|
|
Template Sequence |   |
L | P | A | E | L | K | E | R | V | N | K | A | S | L | A | C | Y | K | A | L | K | . |
. |
. |
. |
C | S | V | Y | A | R | V | D | X | X | V | . |
. |
. |
. |
K | D | G | I | P | Y | V | X | E |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . |
|
| S |
|  |  |  |  |  |  |  | . | . | . | . |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
|
|
|
. | . | . | . | . | . | . | . | . | 250 | . | |
|
|
|
. | . | . | . | . | . | . | . | 260 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|