Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7D7
Confidence17.50%DateThu Jan 5 11:05:25 GMT 2012
Rank16Aligned Residues95
% Identity18%Templatec3g7pA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:nitrogen fixation protein; PDBTitle: crystal structure of a nifx-associated protein of unknown function2 (afe_1514) from acidithiobacillus ferrooxidans atcc at 2.00 a3 resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170 ......... 180... ......190.........200....
Predicted Secondary structure 








.
......








Query SS confidence 






































.








. . .



. . .




















Query Sequence  VNESYCETFGWVSKENLARMKELTYKANDVLKKLFDDAG. LILVDFKLE. . . FGLY. . . KGEVVLGDEFSPDGSRLWDKE
Query Conservation 
             

   
   

 
   
       
.




 
 
...

  ... 
 


 






 
 
   
Alig confidence 






































.








...



...
















....
Template Conservation 






 

  

 
  
  

  

 


  


 

 

     
 








  





 
 






....
Template Sequence  LDKEQRRAIPIIGDPDPEILWRVELFYNAVGLATERASGVXVSPXXKXSHEGFGRXVLIAGRLIVVNKQLRDVHRF. . . .
Template Known Secondary structure 





SS

S



SSS
TT

GGG
....
Template Predicted Secondary structure 




























....
Template SS confidence 















































































   48.50.........60.........70.........80.........90.........100.........110.........120...
 
   205....210. ........220.........230
Predicted Secondary structure 





.....
Query SS confidence 






. . . . .


















Query Sequence  TLEKMDK. . . . . DRFRQSLGGLIEAYEAVAR
Query Conservation    
 


.....   
  
      
  
  
Alig confidence 






.....


















Template Conservation 

 

 

   
 


  

  

 





Template Sequence  GFPSXEKLAEEGDKLVAGALEXIEKFPEVAR
Template Known Secondary structure 
BSS
T
Template Predicted Secondary structure 




Template SS confidence 






























   124.....130.........140.........150....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions