|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | K | Q | A | E | L | Y | R | G | K | A | K | T | V | Y | S | T | E | N | P | D | L | L | V | L | E | F | R | N | D | T | S | A | G | D | G | A | R | I | E | Q | F | D | R | K | G | M | V | N | N | K | F | N | Y | F | I | M | S | K | L | A | E | A | G | I | P | T | Q | M | E | R | L | L | S | D | T | E | C | L |
Query Conservation |   |
|   |   |   |   |   |
|
|   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |
|   |
|   |
|
|   |   |   |
|
|   |
|   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
L | N | I | G | K | K | L | Y | E | G | K | T | K | E | V | Y | E | L | L | D | S | P | G | K | V | L | L | Q | S | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | K | A | A | I | S | N | K | I | T | S | C | I | F | Q | L | L | Q | E | A | G | I | K | T | A | F | T | R | K | C | G | E | T | A | F | I |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
| B |
| S | S |
|  |  |  |
|
| T | T | S |
| S | S |
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| B | S |
|
|  |  |
| S | S | S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | K | L | D | M | V | P | V | E | C | V | V | R | N | R | A | A | G | S | L | V | K | R | L | . |
G | I | E | E | G | I | E | L | N | P | P | L | F | D | L | F | L | K | N | D | A | M | H | D | P | M | V | N | E | S | Y | C | E | T | F | G | W | . |
. |
. |
. |
. |
. |
V | S | K | E | N | L | A | R | M | K | E |
Query Conservation |   |
|   |
|   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |
|
|
| . |
|   |   |
|
|   |   |
|   |   |
|
|
|
|   |   |   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |
|
|
|
|   |   |   |
|   |
|   |   |   |
|
|   |
|
|   |
|   |
|   |   |   |
|
|   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|
|   |
Template Sequence |   |
A | P | Q | C | E | X | I | P | I | E | W | V | C | R | R | I | A | T | G | S | F | L | K | R | N | P | G | V | K | E | G | Y | K | F | Y | P | P | K | V | E | L | F | F | K | D | D | A | N | N | D | P | Q | W | S | E | E | Q | L | I | A | A | K | F | C | F | A | G | L | L | I | G | Q | T | E | V | D | I | X | S | H |
Template Known Secondary structure |   |
 |
|
|  |  |  |
| S |
|  |  |  |  |  | S | B |
|
|  |  |  |  |  |  | S | T | T |
|
| T | T |
| B |
| S | S |
|
|  |  |  |  | S |
|
|
| S | S |
|
|
|
| B |
|  |  |  |  |  | T | T | T |
|  |  | T | T |  |  |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | Y | K | A | N | D | V | L | K | K | L | F | D | D | A | G | L | I | L | V | D | F | K | L | E | F | G | L | Y | . |
. |
K | G | E | V | V | L | G | D | E | F | S | P | D | G | S | R | L | W | D | K | E | T | L | E | K | M | D | K | D | R | F | R | Q | S | L | G | G | L | I | E | A | Y | E | A | V | A | R | R |
Query Conservation |   |
  |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|
|
|   |   | . | . |   |
|   |
|
|
|   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
Template Sequence |   |
A | T | Q | A | I | F | E | I | L | E | K | S | W | L | P | Q | N | C | T | L | V | D | X | K | I | E | F | G | V | D | V | T | T | K | E | I | V | L | A | D | V | I | D | N | D | S | W | R | L | W | P | S | G | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | Q | X | V | K | K | N | F | E | W | V | A | E | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |
|  |  |  |  |  |  |  |
|  |  |  |  | T | T | T |
|
|  |  |  |
| S |
|
|
| T | T | S |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | S | S | S |
|
|
|
|
|  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
  |
  |   |
232 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
L |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
V |
Template Known Secondary structure |   |
G |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
256 |
  |