|   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | M | Q | V | N | P | D | A | H | E | E | Y | Q | R | R | H | N | P | I | W | P | E | L | E | A | V | L | K | S | H | G | A | H | N | Y | A | I | Y | L | D | K | A | R | N | L | L | F | A | M | V | E | I | . |
E | S | E | E | R | W | N | A | V | A | S | T | D | V | C | Q | R | W | W | K | Y | M | T | D | V | M | P |
Query Conservation |   |
  |   |   |
|
|
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   | . |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
Template Sequence |   |
Y | A | S | V | K | T | D | K | T | E | A | F | K | E | A | T | R | . |
. |
. |
X | N | H | E | Q | S | I | R | E | P | G | N | X | R | F | D | I | L | Q | S | A | D | D | P | T | R | F | V | L | Y | E | A | Y | K | T | R | K | D | A | A | A | H | K | E | T | A | H | Y | L | T | W | R | D | T | V | A | D | W | X | A |
Template Known Secondary structure |   |
 |  |  | B |
| G | G | G |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  | T | T | S | T | T |  |  |  |  |  |  |  |  |
| S | S |
| T | T |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  | G | G | G | B | S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
86 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
A | N | P | D |
Query Conservation |   |
  |   |   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |
|   |   |
Template Sequence |   |
E | P | R | K |
Template Known Secondary structure |   |
S |
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|
Template SS confidence |   |
|
|
|
|
  |   |
84 | . | . | . |
  |