 |
Job Description | P32156 | Confidence | 87.33% | Date | Thu Jan 5 11:49:38 GMT 2012 |
Rank | 22 | Aligned Residues | 76 |
% Identity | 11% | Template | d1vqya1 |
SCOP info | Ferredoxin-like
| Dimeric alpha+beta barrel
| NIPSNAP
|
Resolution | 2.40 |
|
 |
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | M | Q | V | N | P | D | A | H | E | E | Y | Q | R | R | H | N | P | I | W | P | E | L | E | A | V | L | K | S | H | G | A | H | N | Y | A | I | Y | L | . |
. |
D | K | A | R | N | L | L | F | A | M | V | E | I | E | S | . |
E | E | R | W | N | A | V | A | S | T | D | V | C | Q | R | W | W | K | Y | M | T | D | V |
Query Conservation |   |
  |   |   |
|
|
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |   | . | . |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   | . |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
I | Y | R | I | R | G | G | K | X | Q | E | Y | L | K | L | V | R | E | E | G | I | A | I | Q | A | . |
. |
. |
P | I | L | G | N | L | I | G | Y | F | V | T | D | I | G | P | L | S | Q | V | I | H | X | W | G | Y | A | S | L | D | D | R | A | E | R | R | G | K | L | A | E | D | Q | R | W | Q | A | F | I | P | R | L |
Template Known Secondary structure |   |
 |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  | . | . | . |  |  |  |
|
|  |  |  |  |  |  |
| S | S | S | S | S | S |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
84 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
M | P |
Query Conservation |   |
  |   |
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
S | V |
Template Known Secondary structure |   |
 | T |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
84 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|