|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | I | R | K | A | F | V | M | Q | V | N | P | D | A | H | E | E | Y | Q | R | R | H | N | P | I | W | P | E | L | E | A | V | L | K | S | H | G | A | H | N | Y | A | I | Y | L | D | K | A | R | N | L | L | F | A | M | V | E | I | E | S | E | E | R | W | N | A | V | A | S | T | D | V | C | Q | R | W | W | K | Y | M |
Query Conservation |   |
|   |
|   |
|   |   |   |   |
|
|
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |   |   |
|
|
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|
|   |   |
|
Template Sequence |   |
L | E | K | H | A | F | K | X | Q | L | N | P | G | X | E | A | E | Y | R | K | R | H | D | E | I | W | P | E | L | V | D | L | L | H | Q | S | G | A | S | D | Y | S | I | H | L | D | R | E | T | N | T | L | F | G | V | L | T | R | P | K | D | H | T | X | A | S | L | P | D | H | P | V | X | K | K | W | W | A | H | X |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | B |
| T | T |
|  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G | G | G | G | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | V | M | P | A | N | P | D | N | S | P | V | S | S | E | L | Q | E | V | F | Y | L | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
Template Sequence |   |
A | D | I | X | A | T | N | P | D | N | S | P | V | Q | S | D | L | V | T | L | F | H | X | P |
Template Known Secondary structure |   |
G | G | G | B |
| B |
| T | T | S |
| B |
|
|  |  |
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |