Job Description P65556 Confidence 98.44% Date Thu Jan 5 12:10:16 GMT 2012 Rank 82 Aligned Residues 87 % Identity 21% Template c3kvhA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:protein syndesmos; PDBTitle: crystal structure of human protein syndesmos (nudt16-like protein) Resolution 1.70 Å

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		24	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50												.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																			.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence											.	.																			.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		Q	A	S	R	E	Q	M	R	A	.	.	Q	C	L	R	H	R	A	T	Y	I	V	V	H	D	G	M	G	K	.	.	.	.	.	.	.	.	.	.	.	I	L	V	Q	R	R	T	E	T	K	D	F	L	P	G	M	L	D	A	T	A	G	G	V	V	Q	A	D	.	E	Q	L	L	E	S	A	R	R	E	A
Query Conservation											.	.																			.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence											.	.						.													.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.							.										.
Template Conservation																		.																														.	.	.	.	.	.							.
Template Sequence		Q	I	S	R	V	E	A	M	R	L	G	P	G	W	S	H	.	S	C	H	A	M	L	Y	A	A	N	P	G	Q	L	F	G	R	I	P	M	R	F	S	V	L	M	Q	M	R	.	.	.	.	.	.	F	D	G	L	L	G	.	F	P	G	G	F	V	D	R	R	F	W	S	L	E	D	G	L	N	R	V	L
Template Known Secondary structure									T	T	S		T	T				.															T	T	T													.	.	.	.	.	.	T	T	S				.		S						T	T	T										S
Template Predicted Secondary structure																		.																														.	.	.	.	.	.							.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	E	L	G	I	A	G	V	P	F	A	E	H	G	Q	F	Y	F	E	D	K	N	C	R	V	W	G	A	L	F	S	C	V	S	H
Query Conservation
Alig confidence												.	.							.	.	.	.	.
Template Conservation												.	.							.	.	.	.	.
Template Sequence		G	L	G	L	R	L	T	E	A	D	.	.	Y	L	S	S	H	L	.	.	.	.	.	T	R	V	V	A	H	L	Y	A	R	Q	L	T
Template Known Secondary structure			S						G	G	G	.	.							.	.	.	.	.
Template Predicted Secondary structure												.	.							.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions