Job Description P65556 Confidence 99.74% Date Thu Jan 5 12:10:16 GMT 2012 Rank 61 Aligned Residues 131 % Identity 18% Template c3gz6A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of shewanella oneidensis nrtr complexed2 with a 27mer dna Resolution 2.90 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.
Predicted Secondary structure																																										.	.																																	.	.
Query SS confidence																																										.	.																																	.	.
Query Sequence		A	T	Y	I	V	V	H	D	G	M	G	K	I	L	V	Q	R	R	T	E	T	K	D	F	L	P	G	M	L	D	A	T	A	G	G	V	V	Q	A	D	.	.	E	Q	L	L	E	S	A	R	R	E	A	E	E	E	L	G	I	A	G	V	P	F	A	E	H	G	Q	F	Y	F	E	D	.	.	K	N	C	R
Query Conservation																																										.	.																																	.	.
Alig confidence																								.	.								.									.	.																																	.	.
Template Conservation																								.	.								.
Template Sequence		A	V	L	F	T	Y	H	D	Q	Q	L	K	V	L	L	V	Q	R	S	N	H	P	.	.	F	L	G	L	W	G	L	.	P	G	G	F	I	D	E	T	C	D	E	S	L	E	Q	T	V	L	R	K	L	A	E	K	T	A	V	V	P	P	Y	I	E	Q	L	C	T	V	G	N	N	S	R	D	A	R	G	W
Template Known Secondary structure									S	S	S										S	S	S	.	.	S	T	T					.	S						T	T	T			S														S	S			S											S	S	S		T	T	S
Template Predicted Secondary structure																								.	.								.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		115	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		V	W	G	A	L	F	S	C	V	S	H	G	P	.	F	A	L	Q	E	D	E	V	S	E	V	C	W	L	T	P	E	E	I	T	A	R	C	D	E	F	T	P	D	S	L	K	A	L	A	L	W	M	K	R	N	A	K	N	E
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		S	V	T	V	C	Y	T	A	L	M	S	Y	Q	A	C	Q	I	Q	I	A	S	V	S	D	V	K	W	W	P	L	A	D	V	L	Q	M	P	L	A	F	D	H	L	Q	L	I	E	Q	A	R	E	R	L	T	Q	K	A	L	Y
Template Known Secondary structure													S									S		S	S										T	T	S		B	S	T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions