Return to main results Retrieve Phyre Job Id

Job DescriptionP08957
Confidence100.00%DateThu Jan 5 11:01:44 GMT 2012
Rank1Aligned Residues485
% Identity96%Templated2ar0a1
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases N-6 DNA Methylase-like
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 













Query SS confidence 















































































Query Sequence  NDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRKMLVHLGEDDK
Query Conservation    
   

   
 

  
         
  




   
                
                  
     
Alig confidence 















































































Template Conservation        

     

  
     
      




   
                
                  
     
Template Sequence  NDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKXCKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRKXLVHLGEDDK
Template Known Secondary structure 
TTT

TTST
S
TTSST

TSSS
Template Predicted Secondary structure 














Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  KLVQAVFHNVSTTITEPKQITALVSNMDSLDWYNGAHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLL
Query Conservation       

            
  

  
              
  
  

 

           


 

  
   

 
 
Alig confidence 















................................































Template Conservation       

         ................................   
           





  

  

 
 
Template Sequence  KLVQAVFHNVSTTITE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PKQITALVSNXDSLDWQYFTPRPLIKTIIHLL
Template Known Secondary structure  TT






................................T







Template Predicted Secondary structure 



................................








Template SS confidence 















































































   86...90.........100. ........110.........120.........130...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGA
Query Conservation         
 






 


 
   
                        
 

      

  

 
 
          
Alig confidence 















































































Template Conservation         
 









  
   
                      
 
 
       

  

 
 
          
Template Sequence  KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALXNCLLHDIEGNLDHGGA
Template Known Secondary structure 


TT

TT
TTTTTTTTTTTS
TSS
TTT


BGGGTBS
Template Predicted Secondary structure 

































Template SS confidence 















































































   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  IRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTD
Query Conservation 
   
 
         

 

 




                     

   
  

 

  


 
   

       
Alig confidence 















































































Template Conservation 
   
           

 

 




                     

      

 


 


 
 
 

       
Template Sequence  IRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFXQHIIETLHPGGRAAVVVPDNVLFEGGKGTD
Template Known Secondary structure  S
TTSTS





TT
SS



S

SS

S


T
Template Predicted Secondary structure 


















































Template SS confidence 















































































   246...250.........260.........270.........280.........290.........300.........310.........320.....
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  IRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPSFGKRTPFTDEHLQPFER
Query Conservation 

  

    
 


 

   
    
 
 

 
 
               
 
 
             
       
  
Alig confidence 















































































Template Conservation 

  

    
 


 

   
  


 
 

   
               
 
 
         
   
       
  
Template Sequence  IRRDLXDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNXPSFGKRTPFTDEHLQPFER
Template Known Secondary structure 

SS
SSS
S

B
SS
TT

S




STT



SSSS


GGGT
Template Predicted Secondary structure 










































Template SS confidence 















































































   326...330.........340.........350.........360.........370.........380.........390.........400.....
 
   404.....410.........420.........430.........440.........450.........460.........470.........480...
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  VYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDSIDADSLPEPD
Query Conservation                                                    

        
                   
Alig confidence 




































































.......



Template Conservation                                        
   
       

         
       .......    
Template Sequence  VYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKD. . . . . . . PEPD
Template Known Secondary structure 
S
TTS
S


S



TTSTTS

SGGGTT

TTGGG
STSSS








.......

Template Predicted Secondary structure 
































.......

Template SS confidence 















































































   406...410.........420.........430.........440.........450.........460.........470.... ....
 
   484.....490.........500.........510.........520.......
Predicted Secondary structure 





Query SS confidence 











































Query Sequence  VLAAEAMGELVQALSELDALMRELGASDEADLQRQLLEEAFGGV
Query Conservation           
     

  
   
            
       
Alig confidence 











































Template Conservation   
  
    
      
  
   
    
       
       
Template Sequence  VLAAEAXGELVQALSELDALXRELGASDEADLQRQLLEEAFGGV
Template Known Secondary structure  T


STT



Template Predicted Secondary structure 








Template SS confidence 











































   486...490.........500.........510.........520.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions