 |
Job Description | P08957 | Confidence | 98.88% | Date | Thu Jan 5 11:01:44 GMT 2012 |
Rank | 93 | Aligned Residues | 113 |
% Identity | 16% | Template | d1yb2a1 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| tRNA(1-methyladenosine) methyltransferase-like
|
Resolution | 2.01 |
|
 |
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | I | H | L | L | K | P | Q | P | R | E | V | V | Q | D | P | A | A | G | T | A | G | F | L | I | E | A | D | R | Y | V | K | S | Q | T | N | D | L | D | D | L | D | G | D | T | Q | D | F | Q | I | H | R | A | F | I | G | L | E | L | V | P | G | T | R | R | L | A | L | M | N | C | L | L | H | D | I | E | G | N |
Query Conservation |   |
  |
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |
|
|   |   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |
Template Sequence |   |
F | G | R | V | I | C | G | L | R | P | G | X | D | I | L | E | V | G | V | G | S | G | N | X | S | S | Y | I | L | Y | A | L | N | G | K | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | L | T | V | V | E | R | D | E | D | N | L | K | K | A | X | D | N | L | S | E | F | Y | D | I | G | N |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|
|
| T | T |
|  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  | T | T | S | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | H | G | G | A | I | R | L | G | N | T | L | G | S | D | G | E | N | L | P | K | A | H | I | V | A | T | N | P | P | F | G | S | A | A | G | T | N | I | T | R | T | F | V | H | P | T | S | N | K | Q | L | C | F | M | Q | H | I | I | E | T | L | H | P | G | G | R | A | A | V | V | V | P | D |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|
|   |
|   |
Alig confidence |   |
|
| . | . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   | . | . | . | . |   |   |   |   |
|
|   | . | . |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |
|   |
Template Sequence |   |
V | R | . |
. |
. |
. |
T | S | R | S | D | I | A | . |
. |
D | F | I | S | D | Q | X | Y | D | A | V | I | A | D | I | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | P | W | N | H | V | Q | K | I | A | S | X | X | K | P | G | S | V | A | T | F | Y | L | P | N |
Template Known Secondary structure |   |
 |  | . | . | . | . |  |  |
| S |
| T | T | . | . | T |
|
|
| S |
|
|  |  |  |  |  |  |
|
| S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| G | G | G | S |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|  | . | . | . | . |  |  |  |
|
|  |  | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
144 | . | |
|
|
|
. | . | . | . | 150 | . | . | |
|
. | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|