Job Description P08957 Confidence 99.34% Date Thu Jan 5 11:01:44 GMT 2012 Rank 43 Aligned Residues 170 % Identity 14% Template c3tqsB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal rna small subunit methyltransferase a; PDBTitle: structure of the dimethyladenosine transferase (ksga) from coxiella2 burnetii Resolution 1.98 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	T	P	R	P	L	I	K	T	I	I	H	L	L	K	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L	M	N
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	H	D	S	F	V	L	Q	K	I	V	S	A	I	H	P	Q	K	T	D	T	L	V	E	I	G	P	G	R	G	A	L	T	D	Y	L	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	C	D	N	L	A	L	V	E	I	D	R	D	L	V	A	F	L	Q	K	K
Template Known Secondary structure																				T	T									T	T	T	T	T					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	.	.	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A
Query Conservation																															.	.
Alig confidence							.	.	.	.	.	.	.																		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	Q	Q	K	.	.	.	.	.	.	.	N	I	T	I	Y	Q	N	D	A	L	Q	F	D	F	S	S	V	K	T	D	K	P	L	R	V	V	G	N	L	P	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	T	P	L	L	F	H	L	F	S	Q	I	H	C	I	E	D	X
Template Known Secondary structure			T	T		T	.	.	.	.	.	.	.	T						S		T	T	T			G	G	G	S			S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.								.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.							.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure													.	.	.	.	.	.																																.
Query SS confidence													.	.	.	.	.	.																																.
Query Sequence		A	V	V	V	P	D	N	V	L	F	E	.	.	.	.	.	.	G	G	K	G	T	D	I	R	R	D	L	M	D	K	C	H	L	H	T	I	L	R	L	P	T	G	I	F	Y	A	Q	.	G	V	K	T	N	V	L	F	F	T	K	G	T	V
Query Conservation													.	.	.	.	.	.																																.
Alig confidence													.	.	.	.	.	.																																.
Template Conservation
Template Sequence		H	F	X	L	Q	K	E	V	V	R	R	I	T	A	E	V	G	S	H	D	Y	G	R	L	S	V	X	A	Q	Y	F	C	D	N	T	Y	L	F	T	V	S	P	Q	A	F	T	P	P	P	R	V	E	S	A	I	I	R	L	I	P	R	H	N
Template Known Secondary structure														T			T	T	S	T	T		S																				G	G	G			S			S	S												S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions