Return to main results Retrieve Phyre Job Id

Job DescriptionP08957
Confidence78.85%DateThu Jan 5 11:01:44 GMT 2012
Rank308Aligned Residues169
% Identity17%Templatec3swrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: structure of human dnmt1 (601-1600) in complex with sinefungin
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  VVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAI. . . . .
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Template Sequence  RTLDVFSGCGGLSEGFHQ. . . . . . . . . . . . . . . . . . AGISDTLWAIEMWDPAAQAFRLN. . . . . NPGSTVFTEDCNILLK
Template Known Secondary structure  S
TTS..................TS
SS.....
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S
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   1140.........1150....... ..1160.........1170.........1180 .........1190......
 
   245....250.........260.........270.........280.........290.. .......300.........310...... .
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Query Sequence  . . . . . RLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCF. MQHIIETLHPGGRAAVVVPDNVLF. E
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Template Sequence  LVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKR
Template Known Secondary structure  T
SB
TT

B


TTT
S



TT

SSS


TTS

SGGGGTTGG
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   1197..1200.........1210.........1220.........1230.........1240.........1250.........1260.........1270......
 
   318.320.........330.........340..... ....350.........360.
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Query Sequence  GGKGTDIRRDLMDKCHLHTILRLPTGIF. YAQGVKTNVLFFTKGT
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Template Sequence  SMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPG
Template Known Secondary structure  GT
GGGGT
SB


TT
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   1277..1280.........1290.........1300.........1310.........1320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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