Job Description P08957 Confidence 78.85% Date Thu Jan 5 11:01:44 GMT 2012 Rank 308 Aligned Residues 169 % Identity 17% Template c3swrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: structure of human dnmt1 (601-1600) in complex with sinefungin Resolution 2.49 Å

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		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L	M	N	C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.												.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		R	T	L	D	V	F	S	G	C	G	G	L	S	E	G	F	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	S	D	T	L	W	A	I	E	M	W	D	P	A	A	Q	A	F	R	L	N	.	.	.	.	.	N	P	G	S	T	V	F	T	E	D	C	N	I	L	L	K
Template Known Secondary structure							S		T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	S									S	S											.	.	.	.	.		T	T	S					S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.																			.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180						.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.
							245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.
Predicted Secondary structure		.	.	.	.	.																																																	.																									.
Query SS confidence		.	.	.	.	.																																																	.																									.
Query Sequence		.	.	.	.	.	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	.	M	Q	H	I	I	E	T	L	H	P	G	G	R	A	A	V	V	V	P	D	N	V	L	F	.	E
Query Conservation		.	.	.	.	.																																																	.																									.
Alig confidence		.	.	.	.	.																																																	.																									.
Template Conservation
Template Sequence		L	V	M	A	G	E	T	T	N	S	R	G	Q	R	L	P	Q	K	G	D	V	E	M	L	C	G	G	P	P	C	Q	G	F	S	G	M	N	R	F	N	S	R	T	Y	S	K	F	K	N	S	L	V	V	S	F	L	S	Y	C	D	Y	Y	R	P	R	F	F	L	L	E	N	V	R	N	F	V	S	F	K	R
Template Known Secondary structure						T		S	B		T	T			B				T	T	T		S									T	T			S	S	S											T	T	S															S								G	G	G	G	T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		1197	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		G	G	K	G	T	D	I	R	R	D	L	M	D	K	C	H	L	H	T	I	L	R	L	P	T	G	I	F	.	Y	A	Q	G	V	K	T	N	V	L	F	F	T	K	G	T
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		S	M	V	L	K	L	T	L	R	C	L	V	R	M	G	Y	Q	C	T	F	G	V	L	Q	A	G	Q	Y	G	V	A	Q	T	R	R	R	A	I	I	L	A	A	A	P	G
Template Known Secondary structure		G														T										G	G	G	G	T		S	B												T	T
Template Predicted Secondary structure
Template SS confidence
		1277	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions