Job Description P08957 Confidence 99.22% Date Thu Jan 5 11:01:44 GMT 2012 Rank 56 Aligned Residues 143 % Identity 16% Template c3q87B_ PDB info PDB header:transferase activator/transferase Chain: B: PDB Molecule:n6 adenine specific dna methylase; PDBTitle: structure of eukaryotic translation termination complex2 methyltransferase mtq2-trm112 Resolution 2.00 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		Y	F	T	P	R	P	L	I	K	T	I	I	H	L	L	.	.	K	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L
Query Conservation																	.	.
Alig confidence																	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	Y	E	P	G	E	D	T	Y	T	L	M	D	A	L	E	R	E	G	L	E	M	K	I	V	L	D	L	G	T	S	T	G	V	I	T	E	Q	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	N	T	V	V	S	T	D	L	N	I	R	A	L	E	S	H	R
Template Known Secondary structure		S																		T			S							T		T	T								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S							S							T		S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																																.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																																.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	N	L	V	R	A	D	L	L	C	.	.	S	I	N	Q	E	S	V	D	V	V	V	F	N	P	P	Y	V	P	D	T	D	D	P	I	I	G	G	G	Y	L	G	.	.	.	.	.	R	E	V	I	D	R	F	V	D	A	V	T	V	G	M	L	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						S	T	T	T	.	.	T	S		G	G	G		S									B	T	T				T	T	T	B			G	G	G	.	.	.	.	.													S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																																.	.	.	.	.
Template SS confidence
																62	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	V	P	D	N	V	L	F	E	G	G	K	G	T	D	I	R	R	D	L	M	D	K	C	H	L	H	T	I	L	R
Query Conservation
Alig confidence											.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		L	L	V	I	E	A	N	R	P	.	.	.	.	.	.	K	E	V	L	A	R	L	E	E	R	G	Y	G	T	R	I	L	K
Template Known Secondary structure						G	G	G			.	.	.	.	.	.										T	T
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions