Job Description P08957 Confidence 98.43% Date Thu Jan 5 11:01:44 GMT 2012 Rank 158 Aligned Residues 167 % Identity 13% Template c3opnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hemolysin; PDBTitle: the crystal structure of a putative hemolysin from lactococcus lactis Resolution 2.05 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	K	T	I	I	H	L	L	K	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L	M	N	C	L	L	H	D	I
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	K	A	L	K	E	F	H	L	E	I	N	G	K	T	C	L	D	I	G	S	S	T	G	G	F	T	D	V	X	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	A	K	L	V	Y	A	L	D	V	G	T	N	Q	L	A	W	K	I	R	S	D	E	R	V	V	V
Template Known Secondary structure									T	T				T	T							T		T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S							S	S										T		T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A	A	V	V	V	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	E	Q	F	N	F	R	N	A	V	L	A	D	F	.	.	.	.	.	.	.	E	Q	G	R	P	S	F	T	S	I	D	V	S	F	I	S	L	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	P	P	L	Y	E	I	L	E	K	N	G	E	V	A	A	L	I	K	P	Q	F
Template Known Secondary structure				S			G	G	G			G	G	G		.	.	.	.	.	.	.		S				S							S	S	S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S		T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
									311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																		.	.	.
Query SS confidence		.	.	.	.	.	.	.																		.	.	.
Query Sequence		.	.	.	.	.	.	.	P	D	N	V	L	F	E	G	G	K	G	T	D	I	R	R	D	.	.	.	L	M	D	K	C	H	L	H	T	I	L	R	L	P	T	G	I	F	Y	A	Q	G	V	K	T	N	V	L	F	F	T	K	G	T	V	A	N
Query Conservation		.	.	.	.	.	.	.																		.	.	.
Alig confidence		.	.	.	.	.	.	.																		.	.	.
Template Conservation
Template Sequence		E	A	G	R	E	Q	V	G	N	G	I	I	R	D	P	K	V	H	Q	X	T	I	E	K	V	L	K	T	A	T	Q	L	G	F	S	V	K	G	L	T	F	S	P	I	K	G	G	A	G	N	V	E	F	L	V	H	L	L	K	D	G	K	A	E
Template Known Secondary structure			S																															T										S	S		B	T	T	T	B										S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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