Job Description P08957 Confidence 98.34% Date Thu Jan 5 11:01:44 GMT 2012 Rank 170 Aligned Residues 143 % Identity 11% Template c3ofkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nodulation protein s; PDBTitle: crystal structure of n-methyltransferase nods from bradyrhizobium2 japonicum wm9 in complex with s-adenosyl-l-homocysteine (sah) Resolution 1.85 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		Y	E	G	L	L	Q	K	N	A	N	E	T	K	S	G	A	G	Q	.	Y	F	T	P	R	P	L	I	K	T	I	I	H	L	L	K	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H
Query Conservation																				.
Alig confidence																				.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	S	L	E	R	E	L	A	N	D	D	P	W	R	L	D	D	N	P	F	E	R	E	R	H	T	Q	L	L	R	L	S	L	S	S	G	A	V	S	N	G	L	E	I	G	C	A	A	G	A	F	T	E	K	L	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	C
Template Known Secondary structure										T	S	S	S	G	G	G	T	T	T																T	T	T	S	S										T	T	S							G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																					.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L	M	N	C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	L	T	V	I	D	V	M	P	R	A	I	G	R	A	C	Q	.	.	.	.	.	.	.	.	.	R	T	K	R	W	S	H	I	S	W	A	A	T	D	I	L	Q	F	S	T	A	E	L	F	D	L	I	V	V	A	E	V	L	Y	Y	L	E	D	M	T	Q	M	R	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S											.	.	.	.	.	.	.	.	.		T	T	T		S	S								T	T	T				S										S		G	G	G	S	S	S						.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.										.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A	A	V	V	V	P	D	N
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	T	A	I	D	N	M	V	K	M	L	A	P	G	G	H	L	V	F	G	S	A	R	D
Template Known Secondary structure		.									T
Template Predicted Secondary structure		.
Template SS confidence
			128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions