Job Description P08957 Confidence 98.41% Date Thu Jan 5 11:01:44 GMT 2012 Rank 162 Aligned Residues 127 % Identity 17% Template c3ocjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis Resolution 1.39 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		P	R	P	L	I	K	T	I	I	H	L	L	K	P	.	.	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L	M	N	C
Query Conservation																.	.
Alig confidence																.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	E	R	H	G	H	F	R	R	A	L	Q	R	H	L	R	P	G	C	V	V	A	S	V	P	C	G	W	X	S	E	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	Y	S	A	C	P	G	V	Q	L	V	G	I	D	Y	D	P	E	A	L	D	G	A	T	R	L	A
Template Known Secondary structure																			T	T						T	T		T	T						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T		T	T								S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	H	D	I	E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A	A	V	V
Query Conservation
Alig confidence										.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	H	A	L	A	G	Q	.	.	.	.	.	.	I	T	L	H	R	Q	D	A	W	K	L	D	T	R	E	G	Y	D	L	L	T	S	N	G	L	N	I	Y	E	P	D	D	A	R	V	T	.	.	.	.	.	.	.	.	.	.	.	E	L	Y	R	R	F	W	Q	A	L	K	P	G	G	A	L	V	T	S
Template Known Secondary structure		T	T	S	T	T	G	G	G	.	.	.	.	.	.								G	G	G					S									S	S	G	G	G									.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.												.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		224	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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