Job Description P08957 Confidence 67.36% Date Thu Jan 5 11:01:44 GMT 2012 Rank 315 Aligned Residues 126 % Identity 18% Template c3me5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: crystal structure of putative dna cytosine methylase from shigella2 flexneri 2a str. 301 Resolution 1.75 Å

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L	M	N	C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I
Query Conservation
Alig confidence																						.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																						.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		P	H	Y	A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	.	.	.	.	F	E	S	I	G	G	Q	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	.	.	.	.	.	.	.	H	Y	C	D	P	A	T	H	H
Template Known Secondary structure		T			S							S		T	T	S						.	.	.	.			T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	S				T	T	T
Template Predicted Secondary structure																						.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.																.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A	A	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		F	N	E	D	I	R	D	I	T	L	S	H	Q	E	G	V	S	D	E	A	A	A	E	H	I	R	Q	H	I	P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	C	.	.	.	.	.	.	.	.	.	.	D	T	Q	G	T	L	F	F	D	V	V	R	I	I	D	A	R	R	P	A	X	F	V	L	E
Template Known Secondary structure				S		T						T	T		T	T	S													S				S													.	.	.	.	.	.	.	.	.	.	T	T	T	T	S															S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	P	D	N	V	L	F	E	G	G	K	G	T	D	I	R	R	D	L
Query Conservation
Alig confidence					.				.
Template Conservation					.				.
Template Sequence		N	V	K	.	N	L	K	.	S	H	D	K	G	K	T	F	R	I	I	X
Template Known Secondary structure				T	.	T	T	T	.	T	G	G	G	G
Template Predicted Secondary structure					.				.
Template SS confidence
		227	.	.		230	.	.		.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions