Job Description P08957 Confidence 98.97% Date Thu Jan 5 11:01:44 GMT 2012 Rank 85 Aligned Residues 170 % Identity 18% Template c3m6wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine Resolution 1.30 Å

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Q	Y	F	T	P	R	P	L	I	K	T	I	I	H	L	L	K	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	L	Y	Y	I	Q	E	P	S	A	Q	A	V	G	V	L	L	D	P	K	P	G	E	R	V	L	D	L	A	A	A	P	G	G	K	T	T	H	L	A	A	R	M	G	G	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	L	A	N	E	V	D	G	K	R	V	R	G	L
Template Known Secondary structure		T	T	S						T	T	T											T	T						S	S		T	T											T	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.									.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.
Query Sequence		L	M	N	C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	.	.	.	.	.	.	.	.	N	K	Q	L	C	F	M	Q	H	I	I
Query Conservation																																																															.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		L	E	N	V	E	R	W	G	A	P	L	A	.	.	.	.	.	.	V	T	Q	A	P	P	R	A	L	A	E	A	F	G	T	Y	F	H	R	V	L	L	D	A	P	C	S	G	E	G	M	F	R	K	D	R	E	A	A	R	H	W	G	P	S	A	P	K	R	M	A	E	V	Q	K	A	L	L	A	Q	A	S
Template Known Secondary structure														.	.	.	.	.	.				S											S														G	G	G	T	T	T		T	T	S	G	G	G			T	T
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	L	H	P	G	G	R	A	A	V	V	V	P	D	N	V	L	F	E	G	G	K	G	T	D	I	R	R	D	L	M	D	K	C	H	L	H	T	I	L	R	L	P
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		R	L	L	G	P	G	G	V	L	V	Y	S	T	C	T	.	.	.	F	A	P	E	E	N	E	G	V	V	A	H	F	L	K	A	H	P	E	F	R	L	E	D	A	R
Template Known Secondary structure		T	T												S		.	.	.			G	G	G	T												T	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions