Job Description P08957 Confidence 99.31% Date Thu Jan 5 11:01:44 GMT 2012 Rank 46 Aligned Residues 143 % Identity 15% Template c3lpmA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of putative methyltransferase small domain protein2 from listeria monocytogenes Resolution 2.40 Å

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		158	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		T	I	I	H	L	L	K	.	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L	M	N	C	L	L	H	D	I	E	G
Query Conservation									.
Alig confidence									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	A	K	F	S	Y	L	P	I	R	K	G	K	I	I	D	L	C	S	G	N	G	I	I	P	L	L	L	S	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	A	K	I	V	G	V	E	I	Q	E	R	L	A	D	X	A	K	R	S	V	A	Y	N	Q	L	E	D
Template Known Secondary structure											S	S							T	T		T	T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S														T	T		T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70																				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	.	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A	A	V	V	V	P	D	N	V	L
Query Conservation																					.
Alig confidence					.	.	.	.													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	I	E	.	.	.	.	I	I	E	Y	D	L	K	K	I	T	D	L	I	P	K	E	R	A	D	I	V	T	C	N	P	P	X	C	T	L	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	R	V	A	A	S	L	L	K	Q	G	G	K	A	N	F	V	H	R	P	E	R	L
Template Known Secondary structure		T			.	.	.	.				S		G	G	G	G	G	G	T	S		T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T	T
Template Predicted Secondary structure					.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	G	G	K	G	T	D	I	R	R	D	L	M	D	K	C	H	L	H	T	I	L	R	L	P	T
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	L	D	I	I	D	I	X	R	K	Y	R	L	E	P	K	R	I	Q	F	V	H	P	R	S	D
Template Known Secondary structure		.	.										T	T											S	S	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions