Job Description P08957 Confidence 98.23% Date Thu Jan 5 11:01:44 GMT 2012 Rank 194 Aligned Residues 159 % Identity 9% Template c3lcvB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sisomicin-gentamicin resistance methylase sgm; PDBTitle: crystal structure of antibiotic related methyltransferase Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		G	Q	Y	F	T	P	R	P	L	I	K	T	I	I	H	L	L	K	.	.	.	.	.	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	H	I	S	T	R	E	R	L	P	H	L	D	E	F	Y	R	E	L	F	R	H	L	P	R	P	N	T	L	R	D	L	A	C	G	L	N	P	L	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	X	G	L	P	A	E	T	V	Y	I	A	S	D	I	D	A	R	L
Template Known Secondary structure		T	T	S							G	G	G									G	G	G	S				S					T	T		T	T	G	G	G			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			T	T								S	B
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	L	A	L	M	N	C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	F	V	D	E	A	L	T	R	L	N	V	P	H	R	T	N	V	A	D	L	L	.	.	.	.	.	.	.	.	E	D	R	L	D	E	P	A	D	V	T	L	L	L	K	T	L	P	C	L	E	T	Q	Q	R	G	S	.	.	.	.	.	.	.	.	.	.	.	.	G	W	E	V	I	D	I	V	N	S
Template Known Secondary structure												T	T										T	T	.	.	.	.	.	.	.	.	T	S				S			S					T	T									S	T	T		.	.	.	.	.	.	.	.	.	.	.	.								S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.									.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.													.	.	.	.	.	.	.	.	220	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	G	R	A	A	V	V	V	P	D	N	V	L	F	E	G	G	K	G	T	D	I	R	R	D	L	M	D	K	C	H	L	H	T	I	L	R	L	P	T	G	I	F	Y
Query Conservation
Alig confidence															.	.	.
Template Conservation															.	.	.
Template Sequence		P	N	I	V	V	T	F	P	T	K	G	X	F	.	.	.	Q	N	Y	S	Q	S	F	E	S	Q	A	R	E	R	S	C	R	I	Q	R	L	E	I	G	N	E	L	I	Y
Template Known Secondary structure		S													.	.	.															T									T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions