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Job DescriptionP08957
Confidence99.10%DateThu Jan 5 11:01:44 GMT 2012
Rank68Aligned Residues155
% Identity16%Templatec3grzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein l11 methyltransferase; PDBTitle: crystal structure of ribosomal protein l11 methylase from2 lactobacillus delbrueckii subsp. bulgaricus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   147..150.........160.........170.........180.........190.........200.........210.........220......
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Query Sequence  GQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL
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Template Sequence  GNHQTTQLAMLGIERA. . MVKPLTVADVGTGSGILAIAAHK. . . . . . . . . . . . . . . . . . . LGAKSVLATDISDESMTAAE
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   158.160.........170... ......180.........190...... ...200.........210......
 
   227..230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  MNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRA
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Template Sequence  ENAALNGIYDIALQKTSL. . . . . . . . LADVDGKFDLIVANILAEI. . . . . . . . . . . . . . . . . LLDLIPQLDSHLNEDGQV
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   217..220.........230.... .....240.........250... ......260.........270.
 
   307..310.........320.........330. ........340.........350.........360.
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Query Sequence  AVVVPDNVLFEGGKGTDIRRDLMDK. CHLHTILRLPTGIFYAQGVKTNVLFFTKGT
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Template Sequence  IF. . . SGID. . YLQLPKIEQALAENSFQIDLKMRAGR. . . . . . . . . WIGLAISRKH
Template Known Secondary structure  .....GGGTTTT.........

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   272. .... ..280.........290.........300... ......310...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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