Return to main results Retrieve Phyre Job Id

Job DescriptionP08957
Confidence99.52%DateThu Jan 5 11:01:44 GMT 2012
Rank19Aligned Residues136
% Identity20%Templatec3gdhC_
PDB info PDB header:transferaseChain: C: PDB Molecule:trimethylguanosine synthase homolog; PDBTitle: methyltransferase domain of human trimethylguanosine2 synthase 1 (tgs1) bound to m7gtp and adenosyl-homocysteine3 (active form)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160... ......170.........180.........190.........200.........210.........220.........
Predicted Secondary structure 

.


























Query SS confidence 












.

































































Query Sequence  TPRPLIKTIIHLL. KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNC
Query Conservation 

  
   

 
 .       
 






 


 
   
                        
 

      

  

Alig confidence 












.























....................





















Template Conservation 


  
  

           


  

 
     

 ....................    
  

 
   
  
  
 
Template Sequence  TPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFAL. . . . . . . . . . . . . . . . . . . . TGMRVIAIDIDPVKIALARNNA
Template Known Secondary structure 

TSTT

TT
TTS....................TT
S
Template Predicted Secondary structure 









....................




Template SS confidence 















































































   673......680.........690.........700.........710 .........720.........730..
 
   230.........240.........250.........260.........270.........280.........290.........300.........
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  LLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVV
Query Conservation   
 
          
   
 
         

 

 




                     

   
  

 

  


Alig confidence 








....







..

















































..




Template Conservation          
....     
  ..        
 

  

             
           
        ..     
Template Sequence  EVYGIADKI. . . . EFICGDFL. . LLASFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRLSKKITN. . NIVYF
Template Known Secondary structure  TT
GGG....S
..GGG


S




SGGGGGSSSB
TTTSSSS

S..
Template Predicted Secondary structure 





....

..


















..

Template SS confidence 















































































   733......740. ........ 750.........760.........770.........780.........790......... 800....
 
   310....
Predicted Secondary structure 


Query SS confidence 




Query Sequence  VPDNV
Query Conservation   
   
Alig confidence 




Template Conservation 
    
Template Sequence  LPRNA
Template Known Secondary structure  TTB
Template Predicted Secondary structure 




Template SS confidence 




   805....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions