Job Description P08957 Confidence 98.26% Date Thu Jan 5 11:01:44 GMT 2012 Rank 187 Aligned Residues 141 % Identity 7% Template c3fzgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of the 16s rrna methylase arma Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L	M	N	C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	H	V	S	S	I	L	D	F	G	C	G	F	N	P	L	A	L	Y	Q	W	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	E	K	I	I	Y	H	A	Y	D	I	D	R	A	E	I	A	F	L	S	S	I	I	G	K	L	K	T	T	I	K	Y	R	F	L	N	K	E
Template Known Secondary structure		S				S						T		T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S										S															S			S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A	A	V	V	V	P	D	N	V	L	F	E	G	G	K	G	T	D	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	.	.	S	D	V	Y	K	G	T	Y	D	V	V	F	L	L	K	M	L	P	V	L	K	Q	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	I	L	D	F	L	Q	L	F	H	T	Q	N	F	V	.	I	S	F	P	I	K	S	L	S	E	K	G	M	E	E	N	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.				T	T	S									T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T								.											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
										166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.															190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		325	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		R	R	D	L	.	.	.	.	M	D	K	C	H	L	H	T	I	L	R	L	P	T	G	I	F	Y
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		Q	L	W	F	E	S	F	T	K	G	W	I	K	I	L	D	S	K	V	I	G	N	E	L	V	Y
Template Known Secondary structure									T	T	T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions