Job Description P08957 Confidence 99.32% Date Thu Jan 5 11:01:44 GMT 2012 Rank 45 Aligned Residues 165 % Identity 15% Template c3fteA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:dimethyladenosine transferase; PDBTitle: crystal structure of a. aeolicus ksga in complex with rna Resolution 3.00 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	L	I	K	T	I	I	H	L	L	K	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L	M	N	C	L	L	H
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		E	G	V	L	K	K	I	A	E	E	L	N	I	E	E	G	N	T	V	V	E	V	G	G	G	T	G	N	L	T	K	V	L	L	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	K	K	L	Y	V	I	E	L	D	R	E	M	V	E	N	L	K	.	.	.	.	.	.
Template Known Secondary structure																T	T							S			S	S							T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S							S		T	T	T	G	G	G	G		.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A	A	V	V	V	P	D
Query Conservation
Alig confidence		.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	S	I	G	D	E	R	L	E	V	I	N	E	D	A	S	K	F	P	F	C	S	L	G	K	E	L	K	V	V	G	N	L	P	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	S	L	I	I	E	N	T	V	Y	N	K	D	C	V	P	L	A	V	F	M	V	Q	K
Template Known Secondary structure		.	.	.	S	S			T	T	B			B		S		T	T	S			G	G	G	T		S	S	B								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										T	T	G	G	G		S
Template Predicted Secondary structure		.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		313	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure				.	.	.																																			.
Query SS confidence				.	.	.																																			.
Query Sequence		N	V	.	.	.	L	F	E	G	G	K	G	T	D	I	R	R	D	L	M	D	K	C	H	L	H	T	I	L	R	L	P	T	G	I	F	Y	A	Q	.	G	V	K	T	N	V	L	F	F	T	K	G	T	V
Query Conservation				.	.	.																																			.
Alig confidence				.	.	.																																			.
Template Conservation
Template Sequence		E	V	A	E	K	L	Q	G	K	K	D	T	G	W	L	S	V	F	V	R	T	F	Y	D	V	N	Y	V	M	T	V	P	P	R	F	F	V	P	P	P	K	V	Q	S	A	V	I	K	L	V	K	N	E	K
Template Known Secondary structure									S	S	S																							T	T	S	S	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions