Job Description P08957 Confidence 98.50% Date Thu Jan 5 11:01:44 GMT 2012 Rank 148 Aligned Residues 167 % Identity 9% Template c3e23A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rpa2492; PDBTitle: crystal structure of the rpa2492 protein in complex with2 sam from rhodopseudomonas palustris, northeast structural3 genomics consortium target rpr299 Resolution 1.60 Å

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		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	F	T	P	R	P	L	I	K	T	I	I	H	L	L	K	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L	M
Query Conservation
Alig confidence																			.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	Q	P	R	S	A	T	L	T	K	F	L	G	E	L	P	.	.	A	G	A	K	I	L	E	L	G	C	G	A	G	Y	Q	A	E	A	X	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	F	D	V	D	A	T	D	G	S	P	E	L	A	A	E	A	S	R
Template Known Secondary structure		T													T	T	S		.	.	T	T						S	S		T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								S
Template Predicted Secondary structure																			.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A	A
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	G	R	P	V	R	T	X	L	F	H	Q	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	D	A	Y	D	A	V	W	A	H	A	C	L	L	H	V	P	R	D	E	L	A	D	.	.	.	.	.	.	.	.	.	.	.	.	V	L	K	L	I	W	R	A	L	K	P	G	G	L	F	Y
Template Known Secondary structure				T	S							G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.			S									S		G	G	G	S								.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.														.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.													.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.										.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		V	V	V	P	D	N	V	.	.	.	.	.	.	.	.	.	L	F	E	G	G	K	G	T	D	I	R	R	D	L	M	D	K	C	H	.	.	L	H	T	I	L	R	L	P	T	G	I	F	Y	A	Q	G	V	K	T	N	V	L	F	F	T	K	G	T
Query Conservation									.	.	.	.	.	.	.	.	.																				.	.
Alig confidence									.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		A	S	Y	K	S	G	E	G	E	G	R	D	K	L	A	R	Y	Y	N	Y	P	S	E	E	W	L	R	A	R	Y	A	E	A	G	T	W	A	S	V	A	V	E	S	S	E	G	K	G	F	D	Q	E	L	A	Q	F	L	H	V	S	V	R	K	P	E
Template Known Secondary structure								S	S					T	T	S																						S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions