Return to main results Retrieve Phyre Job Id

Job DescriptionP08957
Confidence98.12%DateThu Jan 5 11:01:44 GMT 2012
Rank212Aligned Residues136
% Identity18%Templatec3bxoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:n,n-dimethyltransferase; PDBTitle: crystal structure of streptomyces venezuelae desvi
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160.........170.........180.........190.........200......
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  FGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDF
Query Conservation   
  

 

           


 

  
   

 
        
 






 


 
   
                 
Alig confidence 


















......












..






















.................
Template Conservation   

 

             ......      
      ..    






 
     
    .................
Template Sequence  HADVYDLFYLGRGKDYAAE. . . . . . ASDIADLVRSRTP. . EASSLLDVACGTGTHLEHFTKEF. . . . . . . . . . . . . . . . .
Template Known Secondary structure  T

......
T..T

T
TTS.................
Template Predicted Secondary structure 




......

..








.................
Template SS confidence 















































































   6...10.........20.... .....30....... ..40.........50.........60
 
   207..210.........220.........230.........240.........250.........260.........270.........280......
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  QIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTS
Query Conservation         
 

      

  

 
 
          
   
 
         

 

 




                
Alig confidence  ...
















............



























..........









Template Conservation  ...  
 


 
   
  
 ............                            ..........          
Template Sequence  . . . GDTAGLELSEDMLTHAR. . . . . . . . . . . . KRLPDATLHQGDMRDFRLGRKFSAVVSM. . . . . . . . . . FSSVGYLKTT
Template Known Secondary structure  ...SS
............
TT


TTT


SS

..........TTGGGG

S
Template Predicted Secondary structure  ...




............












..........





Template SS confidence 















































































   61........70....... ..80.........90.........100..... ....110.....
 
   287..290.........300.........310..
Predicted Secondary structure 






Query SS confidence 

























Query Sequence  NKQLCFMQHIIETLHPGGRAAVVVPD
Query Conservation       

   
  

 

  


 
 
Alig confidence 

























Template Conservation        
      




 

     
Template Sequence  EELGAAVASFAEHLEPGGVVVVEPWW
Template Known Secondary structure  T



Template Predicted Secondary structure 






Template SS confidence 

























   116...120.........130.........140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions