Job Description P08957 Confidence 98.90% Date Thu Jan 5 11:01:44 GMT 2012 Rank 89 Aligned Residues 125 % Identity 16% Template c2yxeB_ PDB info PDB header:transferase Chain: B: PDB Molecule:protein-l-isoaspartate o-methyltransferase; PDBTitle: crystal structure of l-isoaspartyl protein carboxyl methyltranferase Resolution 2.00 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	Y	F	T	P	R	P	L	I	K	T	I	I	H	L	L	K	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R	L	A	L
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	T	I	S	A	I	H	M	V	G	M	M	C	E	L	L	D	L	K	P	G	M	K	V	L	E	I	G	T	G	C	G	Y	H	A	A	V	T	A	E	I	V	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	L	V	V	S	I	E	R	I	P	E	L	A	E	K	A	E
Template Known Secondary structure		T																T	T			T	T									T	T	S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S							S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G	G	R	A
Query Conservation
Alig confidence													.	.	.	.	.														.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.														.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	L	R	K	L	G	Y	D	N	V	.	.	.	.	.	I	V	I	V	G	D	G	T	L	G	Y	E	P	.	L	A	P	Y	D	R	I	Y	T	T	A	A	G	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	E	P	L	I	R	Q	L	K	D	G	G	K	L
Template Known Secondary structure							T	T		T	T		.	.	.	.	.					S		G	G	G			G	G	.	G									S	S	B	B	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure													.	.	.	.	.														.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		307	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	V	P	D	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	P	V	G	R	Y	L
Template Known Secondary structure							S	S	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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