|   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
. | . | . | . | . | . | . | |
|
|
. | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | L | I | K | T | I | I | H | L | L | K | P | Q | P | R | E | V | . |
V | Q | D | P | A | A | G | . |
. |
. |
T | A | G | F | L | I | E | A | D | R | Y | V | K | S | Q | T | N | D | L | D | D | L | D | G | D | T | Q | D | F | Q | I | H | R | A | F | I | G | L | E | L | V | P | G | T | R | R | L | A | L | M | N |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   | . |
|   |
|
|
|
|
| . | . | . |
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|   |
|
|   |
|
|
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |
|   |
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
| . |
Template Sequence |   |
R | K | V | L | V | R | G | V | R | F | L | A | G | E | A | G | I | S | Q | F | L | D | L | G | S | G | L | P | T | V | Q | N | T | H | E | V | A | Q | S | V | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | D | A | R | V | V | Y | V | D | I | D | P | X | V | L | T | H | G | R | A | . |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|  |  |  |  |  | T |
|
| S |
|
| S | S |
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
  |
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | L | L | H | D | I | E | G | N | L | D | H | G | G | A | I | R | L | G | N | T | L | G | S | D | G | E | N | L | P | K | A | H | I | . |
. |
. |
. |
. |
V | A | T | N | P | P | F | G | S | A | A | G | T | N | I | T | R | T | F | V | H | P | T | S | N | K | Q | L | C | F | M | Q | H | I | I | E | T | L | H | P | G |
Query Conservation |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   | . | . | . | . | . |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|   |   |   |
|
|
|   |
|   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |   |
|
|
|
|
Template Sequence |   |
. |
L | L | A | K | D | P | N | T | A | V | F | T | A | D | V | R | D | P | E | Y | I | L | N | H | P | D | V | R | R | X | I | D | F | S | R | P | A | A | I | X | L | V | G | X | L | H | Y | L | S | P | D | V | V | D | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | V | G | A | Y | R | D | A | L | A | P | G |
Template Known Secondary structure |   |
. |  |  | T | T |
| T | T |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  | T | S |  |  |  |  |  |  |
|
| T | T | S |
|
|  |  |  |  | T | T | T | G | G | G | S |
| T | T | T |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | S |
| T | T |
Template Predicted Secondary structure |   |
. |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 180 | . | . | . | . | . | . | . | . |
  |
  |   |
304 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
G | R | A | A | V |
Query Conservation |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
Template Sequence |   |
S | Y | L | F | X |
Template Known Secondary structure |   |
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
189 | 190 | . | . | . |
  |